Rolf J.F. Ypma
Rolf J.F. Ypma
Netherlands Forensic Institute, The Hague
Verified email at nfi.minvenj.nl
Title
Cited by
Cited by
Year
Relating phylogenetic trees to transmission trees of infectious disease outbreaks
RJF Ypma, WM van Ballegooijen, J Wallinga
Genetics 195 (3), 1055-1062, 2013
1342013
Wiring cost and topological participation of the mouse brain connectome
M Rubinov, RJF Ypma, C Watson, ET Bullmore
Proceedings of the National Academy of Sciences 112 (32), 10032-10037, 2015
1282015
Unravelling transmission trees of infectious diseases by combining genetic and epidemiological data
RJF Ypma, AMA Bataille, A Stegeman, G Koch, J Wallinga, ...
Proceedings of the Royal Society B: Biological Sciences 279 (1728), 444-450, 2012
1262012
Genetic data provide evidence for wind-mediated transmission of highly pathogenic avian influenza
RJF Ypma, M Jonges, A Bataille, A Stegeman, G Koch, M Van Boven, ...
The Journal of infectious diseases 207 (5), 730-735, 2013
612013
Whole-brain functional hypoconnectivity as an endophenotype of autism in adolescents
RL Moseley, RJF Ypma, RJ Holt, D Floris, LR Chura, MD Spencer, ...
Neuroimage: clinical 9, 140-152, 2015
582015
A sign of superspreading in tuberculosis: highly skewed distribution of genotypic cluster sizes
RJF Ypma, HK Altes, D Van Soolingen, J Wallinga, WM Van Ballegooijen
Epidemiology, 395-400, 2013
512013
Default mode hypoconnectivity underlies a sex-related autism spectrum
RJF Ypma, RL Moseley, RJ Holt, N Rughooputh, DL Floris, LR Chura, ...
Biological Psychiatry: Cognitive Neuroscience and Neuroimaging 1 (4), 364-371, 2016
502016
Graph theory analysis of complex brain networks: new concepts in brain mapping applied to neurosurgery
MG Hart, RJF Ypma, R Romero-Garcia, SJ Price, J Suckling
Journal of neurosurgery 124 (6), 1665-1678, 2016
462016
OutbreakTools: a new platform for disease outbreak analysis using the R software
T Jombart, DM Aanensen, M Baguelin, P Birrell, S Cauchemez, ...
Epidemics 7, 28-34, 2014
412014
Infectious disease burden related to child day care in the Netherlands
R Enserink, R Ypma, GA Donker, HA Smit, W van Pelt
The Pediatric infectious disease journal 32 (8), e334-e340, 2013
402013
Statistical analysis of tract-tracing experiments demonstrates a dense, complex cortical network in the mouse
RJF Ypma, ET Bullmore
PLoS computational biology 12 (9), e1005104, 2016
232016
Viral substitution rate variation can arise from the interplay between within-host and epidemiological dynamics
SO Scholle, RJF Ypma, AL Lloyd, K Koelle
The American Naturalist 182 (4), 494-513, 2013
192013
Finding evidence for local transmission of contagious disease in molecular epidemiological datasets
RJF Ypma, T Donker, WM van Ballegooijen, J Wallinga
PloS one 8 (7), e69875, 2013
122013
Monitoring the spread of meticillin-resistant Staphylococcus aureus in The Netherlands from a reference laboratory perspective
T Donker, T Bosch, RJF Ypma, APJ Haenen, WM Van Ballegooijen, ...
Journal of Hospital Infection 93 (4), 366-374, 2016
112016
Automated estimation of the number of contributors in autosomal short tandem repeat profiles using a machine learning approach
CCG Benschop, J van der Linden, J Hoogenboom, R Ypma, H Haned
Forensic Science International: Genetics 43, 102150, 2019
42019
Establishing phone-pair co-usage by comparing mobility patterns
W Bosma, S Dalm, E van Eijk, R el Harchaoui, E Rijgersberg, HT Tops, ...
Science & Justice 60 (2), 180-190, 2020
22020
Transmission tree of the highly pathogenic avian influenza (H5N1) epidemic in Israel, 2015
T Vergne, G Fourniť, MP Markovich, RJF Ypma, R Katz, I Shkoda, ...
Veterinary research 47 (1), 109, 2016
12016
OutbreakTools: A new platform for disease outbreak analysis using the R software
DM Aanensen, M Baguelin, P Birrell, S Cauchemez, A Camacho, C Colijn, ...
Epidemics (7), 28-34.(2014), 2014
2014
Caring for the bigger picture: Monitoring the national spread of MRSA from a reference laboratory perspective.
T Donker, T Bosch, R Ypma, A Haenen, M van Ballegooijen, M Heck, ...
Disease transmission through hospital networks, 107, 2014
2014
Mathemical models of molecular epidemiology: Combining genetic and epidemiological data to unravel infectious disease dynamics
RJF Ypma
Utrecht University, 2013
2013
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Articles 1–20