Jonathan Romiguier
Jonathan Romiguier
Institut des Sciences de l'Evolution de Montpellier
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MitoFinder: Efficient automated large‐scale extraction of mitogenomic data in target enrichment phylogenomics
R Allio, A Schomaker‐Bastos, J Romiguier, F Prosdocimi, B Nabholz, ...
Molecular ecology resources 20 (4), 892-905, 2020
Comparative population genomics in animals uncovers the determinants of genetic diversity
J Romiguier, P Gayral, M Ballenghien, A Bernard, V Cahais, A Chenuil, ...
Nature 515 (7526), 261-263, 2014
Shedding light on the grey zone of speciation along a continuum of genomic divergence
C Roux, C Fraisse, J Romiguier, Y Anciaux, N Galtier, N Bierne
PLoS biology 14 (12), e2000234, 2016
Contrasting GC-content dynamics across 33 mammalian genomes: relationship with life-history traits and chromosome sizes
J Romiguier, V Ranwez, EJP Douzery, N Galtier
Genome research 20 (8), 1001-1009, 2010
Less is more in mammalian phylogenomics: AT-rich genes minimize tree conflicts and unravel the root of placental mammals
J Romiguier, V Ranwez, F Delsuc, N Galtier, EJP Douzery
Molecular biology and evolution 30 (9), 2134-2144, 2013
Codon usage bias in animals: disentangling the effects of natural selection, effective population size, and GC-biased gene conversion
N Galtier, C Roux, M Rousselle, J Romiguier, E Figuet, S Glémin, ...
Molecular biology and evolution 35 (5), 1092-1103, 2018
Evidence for GC-biased gene conversion as a driver of between-lineage differences in avian base composition
CC Weber, B Boussau, J Romiguier, ED Jarvis, H Ellegren
Genome biology 15, 1-16, 2014
Phylogenomics controlling for base compositional bias reveals a single origin of eusociality in corbiculate bees
J Romiguier, SA Cameron, SH Woodard, BJ Fischman, L Keller, CJ Praz
Molecular biology and evolution 33 (3), 670-678, 2016
Extensive recent secondary contacts between four European white oak species
T Leroy, C Roux, L Villate, C Bodénès, J Romiguier, JAP Paiva, C Dossat, ...
New Phytologist 214 (2), 865-878, 2017
Population genomics of eusocial insects: the costs of a vertebrate‐like effective population size
J Romiguier, J Lourenco, P Gayral, N Faivre, LA Weinert, S Ravel, ...
Journal of Evolutionary Biology 27 (3), 593-603, 2014
Biased gene conversion and GC-content evolution in the coding sequences of reptiles and vertebrates
E Figuet, M Ballenghien, J Romiguier, N Galtier
Genome Biology and Evolution 7 (1), 240-250, 2015
OrthoMaM v8: a database of orthologous exons and coding sequences for comparative genomics in mammals
EJP Douzery, C Scornavacca, J Romiguier, K Belkhir, N Galtier, F Delsuc, ...
Molecular biology and evolution 31 (7), 1923-1928, 2014
Analytical biases associated with GC-content in molecular evolution
J Romiguier, C Roux
Frontiers in Genetics 8, 16, 2017
Efficient selection of branch-specific models of sequence evolution
JY Dutheil, N Galtier, J Romiguier, EJP Douzery, V Ranwez, B Boussau
Molecular biology and evolution 29 (7), 1861-1874, 2012
K r /K c but not d N /d S correlates positively with body mass in birds, raising …
CC Weber, B Nabholz, J Romiguier, H Ellegren
Genome biology 15, 1-13, 2014
Fast and robust characterization of time-heterogeneous sequence evolutionary processes using substitution mapping
J Romiguier, E Figuet, N Galtier, EJP Douzery, B Boussau, JY Dutheil, ...
PLoS One 7 (3), e33852, 2012
Genomic evidence for large, long-lived ancestors to placental mammals
J Romiguier, V Ranwez, EJP Douzery, N Galtier
Molecular biology and evolution 30 (1), 5-13, 2013
DILS: Demographic inferences with linked selection by using ABC
C Fraïsse, I Popovic, C Mazoyer, B Spataro, S Delmotte, J Romiguier, ...
Molecular Ecology Resources 21 (8), 2629-2644, 2021
Population genomics of the endangered giant Galápagos tortoise
E Loire, Y Chiari, A Bernard, V Cahais, J Romiguier, B Nabholz, ...
Genome Biology 14, 1-11, 2013
Ant phylogenomics reveals a natural selection hotspot preceding the origin of complex eusociality
J Romiguier, ML Borowiec, A Weyna, Q Helleu, E Loire, C La Mendola, ...
Current Biology 32 (13), 2942-2947. e4, 2022
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Artículos 1–20