Yasunori Osana
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Whole genome assembly of a natto production strain Bacillus subtilis natto from very short read data
Y Nishito, Y Osana, T Hachiya, K Popendorf, A Toyoda, A Fujiyama, ...
BMC genomics 11 (1), 243, 2010
1002010
Whole-genome tiling array analysis of Mycobacterium leprae RNA reveals high expression of pseudogenes and noncoding regions
T Akama, K Suzuki, K Tanigawa, A Kawashima, H Wu, N Nakata, Y Osana, ...
Journal of bacteriology 191 (10), 3321-3327, 2009
712009
Accurate identification of orthologous segments among multiple genomes
T Hachiya, Y Osana, K Popendorf, Y Sakakibara
Bioinformatics 25 (7), 853-860, 2009
442009
Hardware-resource Utilization Analysis on an FPGA-Based Biochemical Simulator ReCSiP
Y Osana
The Institute of Electronics Information and Communication Technical Report …, 2006
412006
Stochastic simulation for biochemical reactions on FPGA
M Yoshimi, Y Osana, T Fukushima, H Amano
International Conference on Field Programmable Logic and Applications, 105-114, 2004
362004
Murasaki: a fast, parallelizable algorithm to find anchors from multiple genomes
K Popendorf, H Tsuyoshi, Y Osana, Y Sakakibara
PLoS One 5 (9), e12651, 2010
332010
MuCCRA-Cube: A 3D dynamically reconfigurable processor with inductive-coupling link
S Saito, Y Kohama, Y Sugimori, Y Hasegawa, H Matsutani, T Sano, ...
2009 International Conference on Field Programmable Logic and Applications, 6-11, 2009
332009
Power reduction techniques for dynamically reconfigurable processor arrays
T Nishimura, K Hirai, Y Saito, T Nakamura, Y Hasegawa, S Tsutsusmi, ...
2008 International Conference on Field Programmable Logic and Applications …, 2008
242008
FPGA implementation of a data-driven stochastic biochemical simulator with the next reaction method
M Yoshimi, Y Iwaoka, Y Nishikawa, T Kojima, Y Osana, A Funahashi, ...
2007 International Conference on Field Programmable Logic and Applications …, 2007
232007
Comparison of the terrestrial cyanobacterium Leptolyngbya sp. NIES-2104 and the freshwater Leptolyngbya boryana PCC 6306 genomes
Y Shimura, Y Hirose, N Misawa, Y Osana, H Katoh, H Yamaguchi, ...
DNA Research 22 (6), 403-412, 2015
222015
Exploiting memory hierarchy for a computational fluid dynamics accelerator on FPGAs
H Morishita, Y Osana, N Fujita, H Amano
2008 International Conference on Field-Programmable Technology, 193-200, 2008
192008
Complete genome sequence of Microcystis aeruginosa NIES-2549, a bloom-forming cyanobacterium from Lake Kasumigaura, Japan
H Yamaguchi, S Suzuki, Y Tanabe, Y Osana, Y Shimura, K Ishida, ...
Genome Announcements 3 (3), 2015
182015
Implementation and evaluation of an arithmetic pipeline on FLOPS-2D: multi-FPGA system
H Morisita, K Inakagata, Y Osana, N Fujita, H Amano
ACM SIGARCH Computer Architecture News 38 (4), 8-13, 2011
162011
Efficient scheduling of rate law functions for ODE-based multimodel biochemical simulation on an FPGA
N Iwanaga, Y Shibata, M Yoshimi, Y Osana, Y Iwaoka, T Fukushima, ...
International Conference on Field Programmable Logic and Applications, 2005 …, 2005
162005
An FPGA implementation of high throughput stochastic simulator for large-scale biochemical systems
M Yoshimi, Y Osana, Y Iwaoka, Y Nishikawa, T Kojima, A Funahashi, ...
2006 International Conference on Field Programmable Logic and Applications, 1-6, 2006
132006
Implementation of recsip: a reconfigurable cell simulation platform
Y Osana, T Fukushima, H Amano
International Conference on Field Programmable Logic and Applications, 766-775, 2003
132003
An FPGA-based acceleration method for metabolic simulation
Y Osana, T Fukushima, M Yoshimi, H Amano
IEICE TRANSACTIONS on Information and Systems 87 (8), 2029-2037, 2004
122004
Reconfigurable out-of-order mechanism generator for unstructured grid computation in computational fluid dynamics
T Akamine, K Inakagata, Y Osana, N Fujita, H Amano
22nd International Conference on Field Programmable Logic and Applications …, 2012
112012
ReCSiP: An FPGA‐based general‐purpose biochemical simulator
Y Osana, M Yoshimi, Y Iwaoka, T Kojima, Y Nishikawa, A Funahashi, ...
Electronics and Communications in Japan (Part II: Electronics) 90 (7), 1-10, 2007
112007
The design of scalable stochastic biochemical simulator on FPGA
M Yoshimi, Y Osana, Y Iwaoka, A Funahashi, N Hiroi, Y Shibata, ...
Proceedings. 2005 IEEE International Conference on Field-Programmable …, 2005
112005
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