Marco Mignardi
Marco Mignardi
Stanford University - Uppsala University
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Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris.
Tabula Muris Consortium
Nature 562 (7727), 367, 2018
In situ sequencing for RNA analysis in preserved tissue and cells
R Ke, M Mignardi, A Pacureanu, J Svedlund, J Botling, C Wählby, ...
Nature methods 10 (9), 857-860, 2013
Single-cell RNA-seq analysis of infiltrating neoplastic cells at the migrating front of human glioblastoma
S Darmanis, SA Sloan, D Croote, M Mignardi, S Chernikova, ...
Cell reports 21 (5), 1399-1410, 2017
Single-cell analysis of human pancreas reveals transcriptional signatures of aging and somatic mutation patterns
M Enge, HE Arda, M Mignardi, J Beausang, R Bottino, SK Kim, SR Quake
Cell 171 (2), 321-330. e14, 2017
In situ detection of individual mRNA molecules and protein complexes or post-translational modifications using padlock probes combined with the in situ proximity ligation assay
I Weibrecht, E Lundin, S Kiflemariam, M Mignardi, I Grundberg, C Larsson, ...
Nature protocols 8 (2), 355-372, 2013
Fourth Generation of Next‐Generation Sequencing Technologies: Promise and Consequences
R Ke, M Mignardi, T Hauling, M Nilsson
Human mutation 37 (12), 1363-1367, 2016
In situ mutation detection and visualization of intratumor heterogeneity for cancer research and diagnostics
I Grundberg, S Kiflemariam, M Mignardi, J Imgenberg-Kreuz, K Edlund, ...
Oncotarget 4 (12), 2407, 2013
Oligonucleotide gap-fill ligation for mutation detection and sequencing in situ
M Mignardi, A Mezger, X Qian, L La Fleur, J Botling, C Larsson, M Nilsson
Nucleic acids research 43 (22), e151-e151, 2015
Regeneration-associated WNT signaling is activated in long-term reconstituting AC133bright acute myeloid leukemia cells
A Beghini, F Corlazzoli, L Del Giacco, M Re, F Lazzaroni, M Brioschi, ...
Neoplasia 14 (12), 1236-IN45, 2012
In situ sequencing identifies TMPRSS2–ERG fusion transcripts, somatic point mutations and gene expression levels in prostate cancers
S Kiflemariam, M Mignardi, MA Ali, A Bergh, M Nilsson, T Sjöblom
The Journal of pathology 234 (2), 253-261, 2014
Fourth-generation sequencing in the cell and the clinic
M Mignardi, M Nilsson
Genome medicine 6 (4), 31, 2014
New technologies for DNA analysis–a review of the READNA Project
S McGinn, D Bauer, T Brefort, L Dong, A El-Sagheer, A Elsharawy, ...
New biotechnology 33 (3), 311-330, 2016
RollFISH achieves robust quantification of single-molecule RNA biomarkers in paraffin-embedded tumor tissue samples
C Wu, M Simonetti, C Rossell, M Mignardi, R Mirzazadeh, L Annaratone, ...
Communications biology 1 (1), 1-8, 2018
Single-cell transcriptomic characterization of 20 organs and tissues from individual mice creates a tabula muris
N Schaum, J Karkanias, NF Neff, AP May, SR Quake, T Wyss-Coray, ...
BioRxiv, 237446, 2018
Bridging histology and bioinformatics—computational analysis of spatially resolved transcriptomics
M Mignardi, O Ishaq, X Qian, C Wählby
Proceedings of the IEEE 105 (3), 530-541, 2016
Image based in situ sequencing for RNA analysis in tissue
A Pacureanu, R Ke, M Mignardi, M Nilsson, C Wählby
2014 IEEE 11th International Symposium on Biomedical Imaging (ISBI), 286-289, 2014
A mouse mammary epithelial cell line permissive for highly efficient human adenovirus growth
C Wu, D Öberg, A Rashid, R Gupta, M Mignardi, S Johansson, ...
Virology 435 (2), 363-371, 2013
Modeling spatial Correlation of transcripts with Application to Developing pancreas
R Liu, M Mignardi, R Jones, M Enge, SK Kim, SR Quake, J Zou
Scientific reports 9 (1), 1-8, 2019
Single-cell transcriptomic atlas of the human endometrium during the menstrual cycle
W Wang, F Vilella, P Alama, I Moreno, M Mignardi, A Isakova, W Pan, ...
Nature Medicine, 1-10, 2020
RollFISH achieves robust quantification of single-molecule RNA biomarkers in paraffin-embedded tumor tissue samples
W Chenglin, M Simonetti, C Rossell, M Mignardi, R Mirzazadeh, ...
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