Ad26/MVA therapeutic vaccination with TLR7 stimulation in SIV-infected rhesus monkeys EN Borducchi, C Cabral, KE Stephenson, J Liu, P Abbink, D Ng’ang’a, ... Nature 540 (7632), 284-287, 2016 | 283 | 2016 |
Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen MP Menden, D Wang, MJ Mason, B Szalai, KC Bulusu, Y Guan, T Yu, ... Nature communications 10 (1), 2674, 2019 | 273 | 2019 |
Minimal functional driver gene heterogeneity among untreated metastases JG Reiter, AP Makohon-Moore, JM Gerold, A Heyde, MA Attiyeh, ... Science 361 (6406), 1033-1037, 2018 | 269 | 2018 |
Expanded cellular clones carrying replication-competent HIV-1 persist, wax, and wane Z Wang, EE Gurule, TP Brennan, JM Gerold, KJ Kwon, NN Hosmane, ... Proceedings of the National Academy of Sciences 115 (11), E2575-E2584, 2018 | 235 | 2018 |
An analysis of genetic heterogeneity in untreated cancers JG Reiter, M Baretti, JM Gerold, AP Makohon-Moore, A Daud, ... Nature Reviews Cancer 19 (11), 639-650, 2019 | 175 | 2019 |
Increased stem cell proliferation in atherosclerosis accelerates clonal hematopoiesis A Heyde, D Rohde, CS McAlpine, S Zhang, FF Hoyer, JM Gerold, ... Cell 184 (5), 1348-1361. e22, 2021 | 167 | 2021 |
TLR7 agonists induce transient viremia and reduce the viral reservoir in SIV-infected rhesus macaques on antiretroviral therapy SY Lim, CE Osuna, PT Hraber, J Hesselgesser, JM Gerold, TL Barnes, ... Science translational medicine 10 (439), eaao4521, 2018 | 156 | 2018 |
Reconstructing metastatic seeding patterns of human cancers JG Reiter, AP Makohon-Moore, JM Gerold, I Bozic, K Chatterjee, ... Nature communications 8 (1), 14114, 2017 | 137 | 2017 |
Quantifying clonal and subclonal passenger mutations in cancer evolution I Bozic, JM Gerold, MA Nowak PLoS computational biology 12 (2), e1004731, 2016 | 130 | 2016 |
Growth dynamics in naturally progressing chronic lymphocytic leukaemia M Gruber, I Bozic, I Leshchiner, D Livitz, K Stevenson, L Rassenti, ... Nature 570 (7762), 474-479, 2019 | 113 | 2019 |
Precancerous neoplastic cells can move through the pancreatic ductal system AP Makohon-Moore, K Matsukuma, M Zhang, JG Reiter, JM Gerold, ... Nature 561 (7722), 201-205, 2018 | 109 | 2018 |
The evolutionary origins of recurrent pancreatic cancer H Sakamoto, MA Attiyeh, JM Gerold, AP Makohon-Moore, A Hayashi, ... Cancer discovery 10 (6), 792-805, 2020 | 77* | 2020 |
Overcoming immunological challenges limiting capsid-mediated gene therapy with machine learning AZ Wec, KS Lin, JC Kwasnieski, S Sinai, J Gerold, ED Kelsic Frontiers in Immunology 12, 674021, 2021 | 15 | 2021 |
Viral rebound kinetics following single and combination immunotherapy for HIV/SIV M Prague, JM Gerold, I Balelli, C Pasin, JZ Li, DH Barouch, JB Whitney, ... BioRxiv, 700401, 2019 | 14 | 2019 |
Forecasting labels under distribution-shift for machine-guided sequence design LB Wheelock, S Malina, J Gerold, S Sinai Machine Learning in Computational Biology, 166-180, 2022 | 3 | 2022 |
25 Estimating the contribution of proliferation to HIV-infected lymphocyte persistence JM Gerold, AL Hill | 2 | 2017 |
Efficient design of optimized AAV capsids using multi-property machine learning models trained across cells, organs and species S Abestesh, I Akartuna, A Brown, M Cramer, F Damani, J Gerold, J Gorns, ... MOLECULAR THERAPY 29 (4), 12-12, 2021 | 1 | 2021 |
Caspid variants and methods of using the same I Chen, J Gerold, J Holth, S Lapan, KS Lin, S Wolock US Patent App. 18/323,135, 2023 | | 2023 |
Improved dependoparvovirus production compositions and methods J Gerold, E Kelsic, S Sinai, A Veres, S Wolock US Patent App. 18/042,890, 2023 | | 2023 |
Machine-Guided Design Reveals AAV Variants Efficient in Transducing NHP Retina After Intravitreal Delivery HT Turunen, M Cramer, J Gerold, H Kuchwara, JC Kwasnieski, S Lapan, ... MOLECULAR THERAPY 30 (4), 555-555, 2022 | | 2022 |