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Anne de Jong
Anne de Jong
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BAGEL3: automated identification of genes encoding bacteriocins and (non-) bactericidal posttranslationally modified peptides
AJ Van Heel, A de Jong, M Montalban-Lopez, J Kok, OP Kuipers
Nucleic acids research 41 (W1), W448-W453, 2013
4852013
BAGEL4: a user-friendly web server to thoroughly mine RiPPs and bacteriocins
AJ van Heel, A de Jong, C Song, JH Viel, J Kok, OP Kuipers
Nucleic acids research 46 (W1), W278-W281, 2018
3932018
Mapping the Pathways to StaphylococcalPathogenesis by Comparative Secretomics
M Sibbald, AK Ziebandt, S Engelmann, M Hecker, A De Jong, ...
Microbiology and Molecular Biology Reviews 70 (3), 755-788, 2006
3592006
Mechanisms of atrial structural changes caused by stretch occurring before and during early atrial fibrillation
AM De Jong, AH Maass, SU Oberdorf-Maass, DJ Van Veldhuisen, ...
Cardiovascular research 89 (4), 754-765, 2011
2672011
BAGEL: a web-based bacteriocin genome mining tool
A de Jong, SAFT van Hijum, JJE Bijlsma, J Kok, OP Kuipers
Nucleic acids research 34 (suppl_2), W273-W279, 2006
2602006
Genome Engineering Reveals Large Dispensable Regions in Bacillus subtilis
H Westers, R Dorenbos, JM Van Dijl, J Kabel, T Flanagan, KM Devine, ...
Molecular Biology and Evolution 20 (12), 2076-2090, 2003
2252003
Signal peptidase I of Bacillus subtilis: patterns of conserved amino acids in prokaryotic and eukaryotic type I signal peptidases.
JM van Dijl, A De Jong, J Vehmaanperä, G Venema, S Bron
The EMBO journal 11 (8), 2819-2828, 1992
2061992
BAGEL2: mining for bacteriocins in genomic data
A De Jong, AJ van Heel, J Kok, OP Kuipers
Nucleic Acids Research 38 (suppl_2), W647-W651, 2010
1772010
PePPER: a webserver for prediction of prokaryote promoter elements and regulons
A de Jong, H Pietersma, M Cordes, OP Kuipers, J Kok
BMC genomics 13 (1), 1-10, 2012
1642012
Evaluation of Bottlenecks in the Late Stages of Protein Secretion in Bacillus subtilis
A Bolhuis, H Tjalsma, HE Smith, A De Jong, R Meima, G Venema, S Bron, ...
Applied and Environmental Microbiology 65 (7), 2934-2941, 1999
1561999
CodY of Streptococcus pneumoniae: Link between Nutritional Gene Regulation and Colonization
WT Hendriksen, HJ Bootsma, S Estevao, T Hoogenboezem, A De Jong, ...
Journal of bacteriology 190 (2), 590-601, 2008
1552008
Improving the predictive value of the competence transcription factor (ComK) binding site in Bacillus subtilis using a genomic approach
LW Hamoen, WK Smits, A Jong, S Holsappel, OP Kuipers
Nucleic acids research 30 (24), 5517-5528, 2002
1542002
A novel scheme to assess factors involved in the reproducibility of DNA-microarray data
SAFT Van Hijum, A De Jong, RJS Baerends, HA Karsens, NE Kramer, ...
Genome Biology 6 (4), 1-35, 2005
1322005
Identification of the Potential Active Site of the Signal Peptidase SipS of Bacillus subtilis: STRUCTURAL AND FUNCTIONAL SIMILARITIES WITH LexA-LIKE PROTEASES (∗)
JM van Dijl, A de Jong, G Venema, S Bron
Journal of Biological Chemistry 270 (8), 3611-3618, 1995
1291995
LmrCD is a major multidrug resistance transporter in Lactococcus lactis
J Lubelski, A De Jong, R Van Merkerk, H Agustiandari, OP Kuipers, J Kok, ...
Molecular microbiology 61 (3), 771-781, 2006
1212006
Genome2D: a visualization tool for the rapid analysis of bacterial transcriptome data
RJS Baerends, WK Smits, A de Jong, LW Hamoen, J Kok, OP Kuipers
Genome biology 5 (5), 1-6, 2004
1132004
The endogenous Bacillus subtilis (natto) plasmids pTA1015 and pTA1040 contain signal peptidase‐encoding genes: identification of a new structural module on …
WJJ Meijer, A De Jong, G Bea, A Wisman, H Tjalsma, G Venema, S Bron, ...
Molecular microbiology 17 (4), 621-631, 1995
971995
Mining prokaryotes for antimicrobial compounds: from diversity to function
V Tracanna, A de Jong, MH Medema, OP Kuipers
FEMS Microbiology Reviews 41 (3), 417-429, 2017
882017
Distinct roles of phenol-soluble modulins in spreading of Staphylococcus aureus on wet surfaces
E Tsompanidou, EL Denham, D Becher, A de Jong, G Buist, ...
Applied and environmental microbiology 79 (3), 886-895, 2013
862013
High-and low-affinity cre boxes for CcpA binding in Bacillus subtilis revealed by genome-wide analysis
BC Marciniak, M Pabijaniak, A de Jong, R Dűhring, G Seidel, W Hillen, ...
BMC genomics 13 (1), 1-15, 2012
852012
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