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Yuhan Hao
Yuhan Hao
New York University, New York Genome Center
Verified email at nyu.edu - Homepage
Title
Cited by
Cited by
Year
Comprehensive integration of single-cell data
T Stuart, A Butler, P Hoffman, C Hafemeister, E Papalexi, WM Mauck, ...
cell 177 (7), 1888-1902. e21, 2019
101972019
Integrated analysis of multimodal single-cell data
Y Hao, S Hao, E Andersen-Nissen, WM Mauck, S Zheng, A Butler, MJ Lee, ...
Cell 184 (13), 3573-3587. e29, 2021
64102021
Scalable, multimodal profiling of chromatin accessibility, gene expression and protein levels in single cells
EP Mimitou, CA Lareau, KY Chen, AL Zorzetto-Fernandes, Y Hao, ...
Nature biotechnology 39 (10), 1246-1258, 2021
2592021
Dictionary learning for integrative, multimodal and scalable single-cell analysis
Y Hao, T Stuart, MH Kowalski, S Choudhary, P Hoffman, A Hartman, ...
Nature biotechnology, 1-12, 2023
1552023
Periodontal pathogens are a risk factor of oral cavity squamous cell carcinoma, independent of tobacco and alcohol and human papillomavirus
I Ganly, L Yang, RA Giese, Y Hao, CW Nossa, LGT Morris, M Rosenthal, ...
International journal of cancer 145 (3), 775-784, 2019
1232019
Parkinson’s disease and bacteriophages as its overlooked contributors
G Tetz, SM Brown, Y Hao, V Tetz
Scientific reports 8 (1), 10812, 2018
1182018
Characterizing the molecular regulation of inhibitory immune checkpoints with multimodal single-cell screens
E Papalexi, EP Mimitou, AW Butler, S Foster, B Bracken, WM Mauck III, ...
Nature genetics 53 (3), 322-331, 2021
1092021
A RORγt+ cell instructs gut microbiota-specific Treg cell differentiation
R Kedmi, TA Najar, KR Mesa, A Grayson, L Kroehling, Y Hao, S Hao, ...
Nature 610 (7933), 737-743, 2022
952022
Niche-selective inhibition of pathogenic Th17 cells by targeting metabolic redundancy
L Wu, KER Hollinshead, Y Hao, C Au, L Kroehling, C Ng, WY Lin, D Li, ...
Cell 182 (3), 641-654. e20, 2020
822020
Type 1 Diabetes: an Association Between Autoimmunity, the Dynamics of Gut Amyloid-producing E. coli and Their Phages
G Tetz, SM Brown, Y Hao, V Tetz
Scientific reports 9 (1), 9685, 2019
722019
C reactive protein impairs adaptive immunity in immune cells of patients with melanoma
T Yoshida, J Ichikawa, I Giuroiu, AS Laino, Y Hao, M Krogsgaard, ...
Journal for immunotherapy of cancer 8 (1), 2020
652020
Characterizing cellular heterogeneity in chromatin state with scCUT&Tag-pro
B Zhang, A Srivastava, E Mimitou, T Stuart, I Raimondi, Y Hao, P Smibert, ...
Nature biotechnology 40 (8), 1220-1230, 2022
532022
Oral and gastric microbiome in relation to gastric intestinal metaplasia
F Wu, L Yang, Y Hao, B Zhou, J Hu, Y Yang, S Bedi, NG Sanichar, ...
International journal of cancer 150 (6), 928-940, 2022
312022
Differential effects of depot medroxyprogesterone acetate administration on vaginal microbiome in Hispanic White and Black women
L Yang, Y Hao, J Hu, D Kelly, H Li, S Brown, C Tasker, NE Roche, ...
Emerging microbes & infections 8 (1), 197-210, 2019
292019
Efficient combinatorial targeting of RNA transcripts in single cells with Cas13 RNA Perturb-seq
HH Wessels, A Méndez-Mancilla, Y Hao, E Papalexi, WM Mauck III, L Lu, ...
Nature methods 20 (1), 86-94, 2023
272023
HPViewer: sensitive and specific genotyping of human papillomavirus in metagenomic DNA
Y Hao, L Yang, A Galvao Neto, MR Amin, D Kelly, SM Brown, RC Branski, ...
Bioinformatics 34 (12), 1986-1995, 2018
192018
Cognitive diversity: A measurement of dissimilarity between multiple scoring systems
DF Hsu, BS Kristal, Y Hao, C Schweikert
Journal of Interconnection Networks 19 (01), 1940001, 2019
162019
Bioinformatics in microbiome analysis
Y Hao, Z Pei, SM Brown
Methods in Microbiology 44, 1-18, 2017
152017
MGS-Fast: Metagenomic shotgun data fast annotation using microbial gene catalogs
SM Brown, H Chen, Y Hao, BP Laungani, TA Ali, C Dong, C Lijeron, ...
GigaScience 8 (4), giz020, 2019
142019
Progressive dysbiosis of human orodigestive microbiota along the sequence of gastroesophageal reflux, Barrett's esophagus and esophageal adenocarcinoma
Y Hao, U Karaoz, L Yang, PS Yachimski, W Tseng, CW Nossa, W Ye, ...
International Journal of Cancer 151 (10), 1703-1716, 2022
92022
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