| Genomic monitoring of SARS-CoV-2 uncovers an Nsp1 deletion variant that modulates type I interferon response J Lin, C Tang, H Wei, B Du, C Chen, M Wang, Y Zhou, M Yu, L Cheng, ... Cell host & microbe 29 (3), 489-502. e8, 2021 | 108 | 2021 |
| Identification of cucumber circular RNAs responsive to salt stress YX Zhu, JH Jia, L Yang, YC Xia, HL Zhang, JB Jia, R Zhou, PY Nie, JL Yin, ... BMC Plant Biology 19, 1-18, 2019 | 90 | 2019 |
| Transcriptome-Wide Identification and Characterization of Potato Circular RNAs in Response to Pectobacterium carotovorum Subspecies brasiliense Infection R Zhou, Y Zhu, J Zhao, Z Fang, S Wang, J Yin, Z Chu, D Ma International Journal of Molecular Sciences 19 (1), 71, 2017 | 55 | 2017 |
| Sequential fate-switches in stem-like cells drive the tumorigenic trajectory from human neural stem cells to malignant glioma X Wang, R Zhou, Y Xiong, L Zhou, X Yan, M Wang, F Li, C Xie, Y Zhang, ... Cell Research, 1-19, 2021 | 54 | 2021 |
| The 25–26 nt Small RNAs in Phytophthora parasitica Are Associated with Efficient Silencing of Homologous Endogenous Genes J Jia, W Lu, C Zhong, R Zhou, J Xu, W Liu, X Gou, Q Wang, J Yin, C Xu, ... Frontiers in microbiology 8, 773, 2017 | 33 | 2017 |
| Spatial transcriptomics reveals niche-specific enrichment and vulnerabilities of radial glial stem-like cells in malignant gliomas Y Ren, Z Huang, L Zhou, P Xiao, J Song, P He, C Xie, R Zhou, M Li, ... Nature Communications 14 (1), 1028, 2023 | 32 | 2023 |
| Integrated single-cell RNA sequencing analysis reveals distinct cellular and transcriptional modules associated with survival in lung cancer L Zhang, Y Zhang, C Wang, Y Yang, Y Ni, Z Wang, T Song, M Yao, Z Liu, ... Signal Transduction and Targeted Therapy 7 (1), 9, 2022 | 29 | 2022 |
| SCAPE: a mixture model revealing single-cell polyadenylation diversity and cellular dynamics during cell differentiation and reprogramming R Zhou, X Xiao, P He, Y Zhao, M Xu, X Zheng, R Yang, S Chen, L Zhou, ... Nucleic Acids Research 50 (11), e66, 2022 | 14 | 2022 |
| Spatial transcriptomics in development and disease R Zhou, G Yang, Y Zhang, Y Wang Molecular Biomedicine 4 (1), 32, 2023 | 8 | 2023 |
| Sashimi.py: a flexible toolkit for combinatorial analysis of genomic data Y Zhang, Y Wang, R Zhou bioRxiv, 2022 | 5 | 2022 |
| Short-read and long-read full-length transcriptome of mouse neural stem cells across neurodevelopmental stages C Ding, X Yan, M Xu, R Zhou, Y Zhao, D Zhang, Z Huang, Z Pan, P Xiao, ... Scientific Data 9 (1), 1-10, 2022 | 3 | 2022 |
| Short-read and long-read RNA sequencing of mouse hematopoietic stem cells at bulk and single-cell levels X Zheng, D Zhang, M Xu, W Zeng, R Zhou, Y Zhang, C Tang, L Chen, ... Scientific Data 8 (1), 309, 2021 | 2 | 2021 |
| Trackplot: A flexible toolkit for combinatorial analysis of genomic data Y Zhang, R Zhou, L Liu, L Chen, Y Wang PLoS Computational Biology 19 (9), e1011477, 2023 | 1 | 2023 |
| SCAPE-APA: a package for estimating alternative polyadenylation events from scRNA-seq data G Cheng, T Le, R Zhou, L Cheng bioRxiv, 2024.03. 12.584547, 2024 | | 2024 |
| Single-cell transcriptome analysis reveals the cellular atlas of human intracranial aneurysm and highlights inflammation features associated with aneurysm rupture H Ji, Y Li, H Sun, R Chen, R Zhou, A Xiao, Y Yang, R Wang, C You, Y Liu bioRxiv, 2023.04. 06.535955, 2023 | | 2023 |
