Jordi Abante
Title
Cited by
Cited by
Year
Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen
MP Menden, D Wang, MJ Mason, B Szalai, KC Bulusu, Y Guan, T Yu, ...
Nature communications 10 (1), 1-17, 2019
402019
An information-theoretic approach to the modeling and analysis of whole-genome bisulfite sequencing data
G Jenkinson, J Abante, AP Feinberg, J Goutsias
BMC bioinformatics 19 (1), 1-23, 2018
62018
HiMMe: using genetic patterns as a proxy for genome assembly reliability assessment
J Abante, N Ghaffari, CD Johnson, A Datta
BMC genomics 18 (1), 694, 2017
32017
Ranking genomic features using an information-theoretic measure of epigenetic discordance
G Jenkinson, J Abante, MA Koldobskiy, AP Feinberg, J Goutsias
BMC bioinformatics 20 (1), 175, 2019
22019
Universal promoter scanning by Pol II during transcription initiation in Saccharomyces cerevisiae
C Qiu, H Jin, I Vvedenskaya, JA Llenas, T Zhao, I Malik, AM Visbisky, ...
Genome biology 21, 1-31, 2020
12020
Computational considerations in transcriptome assemblies and their evaluation, using high quality human rna-seq data
N Ghaffari, J Abante, R Singh, PD Blood, CD Johnson
Proceedings of the XSEDE16 Conference on Diversity, Big Data, and Science at …, 2016
12016
A Dysregulated DNA Methylation Landscape Linked to Gene Expression in MLL-Rearranged AML
MA Koldobskiy, J Abante, G Jenkinson, E Pujadas, A Tetens, F Zhao, ...
Epigenetics, 1-18, 2020
2020
Promoter scanning during transcription initiation in Saccharomyces cerevisiae: Pol II in the" shooting gallery"
C Qiu, H Jin, I Vvedenskaya, JA Llenas, T Zhao, I Malik, AM Visbisky, ...
bioRxiv, 810127, 2020
2020
What are the most influencing factors in reconstructing a reliable transcriptome assembly?
N Ghaffari, J Abante, R Singh, PD Blood, L Pipes, C Mason, CD Johnson
bioRxiv, 220269, 2017
2017
Fast, Flexible, and Free: Enabling Large-Scale Genome Assembly and Analysis with the Bridges Supercomputer
P Blood, N Ghaffari, AS Seetharam, L Pipes, R Singh, J Abante, ...
Plant and Animal Genome XXVI Conference (January 13-17, 2018), 0
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Articles 1–10