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Marko Budinich
Marko Budinich
Biomemakers Inc.
Dirección de correo verificada de univ-nantes.fr
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Año
The bioleaching potential of a bacterial consortium
M Latorre, MP Cortés, D Travisany, A Di Genova, M Budinich, ...
Bioresource technology 218, 659-666, 2016
892016
A new genome of Acidithiobacillus thiooxidans provides insights into adaptation to a bioleaching environment
D Travisany, MP Cortés, M Latorre, A Di Genova, M Budinich, ...
Research in microbiology 165 (9), 743-752, 2014
692014
Environmental vulnerability of the global ocean epipelagic plankton community interactome
S Chaffron, E Delage, M Budinich, D Vintache, N Henry, C Nef, M Ardyna, ...
Science Advances 7 (35), eabg1921, 2021
592021
A multi-objective constraint-based approach for modeling genome-scale microbial ecosystems
M Budinich, J Bourdon, A Larhlimi, D Eveillard
PloS one 12 (2), e0171744, 2017
552017
Stoichiometric modeling of oxidation of reduced inorganic sulfur compounds (Riscs) in Acidithiobacillus thiooxidans
RA Bobadilla Fazzini, MP Cortés, L Padilla, D Maturana, M Budinich, ...
Biotechnology and Bioengineering 110 (8), 2242-2251, 2013
542013
Metabolomic study of Chilean biomining bacteria Acidithiobacillus ferrooxidans strain Wenelen and Acidithiobacillus thiooxidans strain Licanantay
P Martínez, S Gálvez, N Ohtsuka, M Budinich, MP Cortés, C Serpell, ...
Metabolomics 9, 247-257, 2013
452013
Enterococcus faecalis reconfigures its transcriptional regulatory network activation at different copper levels
M Latorre, J Galloway-Peña, JH Roh, M Budinich, A Reyes-Jara, ...
Metallomics 6 (3), 572-581, 2014
262014
Global transcriptional responses of Acidithiobacillus ferrooxidans Wenelen under different sulfide minerals
M Latorre, N Ehrenfeld, MP Cortés, D Travisany, M Budinich, A Aravena, ...
Bioresource Technology 200, 29-34, 2016
252016
Contribution of genome‐scale metabolic modelling to niche theory
A Régimbeau, M Budinich, A Larhlimi, JJ Pierella Karlusich, O Aumont, ...
Ecology Letters 25 (6), 1352-1364, 2022
82022
Enterococcus faecalis reconfigures its transcriptional regulatory network activation at different copper levels. Metallomics 6: 572–581
M Latorre, J Galloway-Pena, JH Roh, M Budinich, A Reyes-Jara, ...
72014
Insights into biotic and abiotic modulation of ocean mesopelagic communities
J Rigonato, M Budinich, A Murillo, M Brandão, J Karlusich, YD Soviadan, ...
22022
Enterococcus faecalis reconfigures its gene regulatory network activation under copper exposure
M Latorre, J Galloway-Peña, JH Roh, M Budinich, A Reyes-Jara, ...
Metallomics: integrated biometal science 6 (3), 572, 2014
12014
Community metabolic modeling of host-microbiota interactions through multi-objective optimization
A Lambert, M Budinich, M Mahe, S Chaffron, D Eveillard
bioRxiv, 2023.09. 15.557910, 2023
2023
Impact of the species compartment definition on quantitative modeling of microbial communities
M Budinich, J Bourdon, D Eveillard
bioRxiv, 018010, 2015
2015
OPINION PAPER Evolutionary Constraint-Based Formulation Requires New Bi-level Solving Techniques
M Budinich, J Bourdon, A Larhlimi, D Eveillard
Computational Methods in Systems Biology: 13th International Conference …, 2015
2015
MeDUSA: a sage-based tool for computing the stoichiometric capacitance of a metabolic network
M Budinich, D Eveillard, J Bourdon, A Larhlimi
2013
Global transcriptional responses of Acidithiobacillus ferrooxidans Wenelen under different sulfide minerals
D TRAVISANY, M BUDINICH, M GONZALEZ, RA BOBADILLA-FAZZINI, ...
CCSD: publication du rapport d’activité 2021
G Utilisateur, A Régimbeau, M Budinich, A Larhlimi, JJP Karlusich, ...
Environmental vulnerability of the global ocean plankton community interactome Short title: Vulnerability of plankton communities to environmental change
S Chaffron, E Delage, M Budinich, D Vintache, N Henry, C Nef, M Ardyna, ...
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