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Erney Ramírez-Aportela
Erney Ramírez-Aportela
Postdoc, National Center for Biotechnology (CNB-CSIC). Madrid. Spain
Verified email at cnb.csic.es
Title
Cited by
Cited by
Year
FRODOCK 2.0: fast protein–protein docking server
E Ramírez-Aportela, JR López-Blanco, P Chacón
Bioinformatics 32 (15), 2386-2388, 2016
1332016
Automatic local resolution-based sharpening of cryo-EM maps
E Ramírez-Aportela, JL Vilas, A Glukhova, R Melero, P Conesa, ...
Bioinformatics 36 (3), 765-772, 2020
1292020
Near-atomic cryo-EM structure of PRC1 bound to the microtubule
EH Kellogg, S Howes, SC Ti, E Ramírez-Aportela, TM Kapoor, P Chacón, ...
Proceedings of the National Academy of Sciences 113 (34), 9430-9439, 2016
922016
Synthetic inhibitors of bacterial cell division targeting the GTP-binding site of FtsZ
LB Ruiz-Avila, S Huecas, M Artola, A Vergoñós, E Ramírez-Aportela, ...
ACS chemical biology 8 (9), 2072-2083, 2013
772013
Survey of the analysis of continuous conformational variability of biological macromolecules by electron microscopy
COS Sorzano, A Jiménez, J Mota, JL Vilas, D Maluenda, M Martínez, ...
Acta Crystallographica Section F: Structural Biology Communications 75 (1 …, 2019
592019
DeepRes: a new deep-learning-and aspect-based local resolution method for electron-microscopy maps
E Ramírez-Aportela, J Mota, P Conesa, JM Carazo, COS Sorzano
IUCrJ 6 (6), 1054-1063, 2019
492019
Continuous flexibility analysis of SARS-CoV-2 spike prefusion structures
R Melero, COS Sorzano, B Foster, JL Vilas, M Martínez, R Marabini, ...
IUCrJ 7 (6), 1059-1069, 2020
452020
The molecular control of calcitonin receptor signaling
E Dal Maso, A Glukhova, Y Zhu, J Garcia-Nafria, CG Tate, S Atanasio, ...
ACS Pharmacology & Translational Science 2 (1), 31-51, 2019
442019
Self-organization of FtsZ polymers in solution reveals spacer role of the disordered C-terminal tail
S Huecas, E Ramírez-Aportela, A Vergoñós, R Núñez-Ramírez, O Llorca, ...
Biophysical journal 113 (8), 1831-1844, 2017
432017
The structural assembly switch of cell division protein FtsZ probed with fluorescent allosteric inhibitors
M Artola, LB Ruíz-Avila, E Ramírez-Aportela, RF Martínez, ...
Chemical Science 8 (2), 1525-1534, 2017
412017
Effective GTP-replacing FtsZ inhibitors and antibacterial mechanism of action
M Artola, LB Ruiz-Avila, A Vergoñós, S Huecas, L Araujo-Bazán, ...
ACS Chemical Biology 10 (3), 834-843, 2015
372015
FSC-Q: a CryoEM map-to-atomic model quality validation based on the local Fourier shell correlation
E Ramírez-Aportela, D Maluenda, YC Fonseca, P Conesa, R Marabini, ...
Nature Communications 12 (1), 42, 2021
362021
Structural basis for selective recognition of endogenous and microbial polysaccharides by macrophage receptor SIGN-R1
N Silva-Martín, SG Bartual, E Ramírez-Aportela, P Chacon, CG Park, ...
Structure 22 (11), 1595-1606, 2014
362014
A new algorithm for high-resolution reconstruction of single particles by electron microscopy
COS Sorzano, J Vargas, JM de la Rosa-Trevín, A Jiménez, D Maluenda, ...
Journal of structural biology 204 (2), 329-337, 2018
332018
Understanding nucleotide-regulated FtsZ filament dynamics and the monomer assembly switch with large-scale atomistic simulations
E Ramírez-Aportela, JR López-Blanco, JM Andreu, P Chacón
Biophysical journal 107 (9), 2164-2176, 2014
332014
Advances in xmipp for cryo–electron microscopy: From xmipp to scipion
D Strelak, A Jiménez-Moreno, JL Vilas, E Ramírez-Aportela, ...
Molecules 26 (20), 6224, 2021
322021
Using Scipion for stream image processing at Cryo-EM facilities
J Gómez-Blanco, JM de la Rosa-Trevín, R Marabini, L Del Cano, ...
Journal of structural biology 204 (3), 457-463, 2018
292018
Local resolution estimates of cryoEM reconstructions
JL Vilas, JB Heymann, HD Tagare, E Ramírez-Aportela, JM Carazo, ...
Current opinion in structural biology 64, 74-78, 2020
252020
Integration of Cryo-EM Model Building Software in Scipion
M Martínez, A Jiménez-Moreno, D Maluenda, E Ramírez-Aportela, ...
Journal of Chemical Information and Modeling 60 (5), 2533-2540, 2020
252020
Algorithmic robustness to preferred orientations in single particle analysis by CryoEM
COS Sorzano, D Semchonok, SC Lin, YC Lo, JL Vilas, A Jiménez-Moreno, ...
Journal of Structural Biology 213 (1), 107695, 2021
222021
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