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Pubudu Handakumbura
Pubudu Handakumbura
University of Massachusetts Amherst, Pacific Northwest National Laboratory
Verified email at pnnl.gov
Title
Cited by
Cited by
Year
An Arabidopsis gene regulatory network for secondary cell wall synthesis
M Taylor-Teeples, L Lin, M De Lucas, G Turco, TW Toal, A Gaudinier, ...
Nature 517 (7536), 571-575, 2015
6542015
Rhizosphere engineering: enhancing sustainable plant ecosystem productivity
AH Ahkami, RA White III, PP Handakumbura, C Jansson
Rhizosphere 3, 233-243, 2017
3022017
Perturbation ofBrachypodium distachyon CELLULOSE SYNTHASE A4or7results in abnormal cell walls
PP Handakumbura, DA Matos, KS Osmont, MJ Harrington, K Heo, K Kafle, ...
BMC plant biology 13, 1-16, 2013
862013
Transcriptional Regulation of Grass Secondary Cell Wall Biosynthesis: Playing Catch-Up with Arabidopsis thaliana
PP Handakumbura, SP Hazen
Frontiers in Plant Science 3, 74, 2012
772012
Crops for carbon farming
C Jansson, C Faiola, A Wingler, XG Zhu, A Kravchenko, MA De Graaff, ...
Frontiers in Plant Science 12, 636709, 2021
742021
Vision, challenges and opportunities for a Plant Cell Atlas
SG Jha, AT Borowsky, BJ Cole, N Fahlgren, A Farmer, SC Huang, P Karia, ...
Elife 10, e66877, 2021
422021
Rhizosphere engineering: enhancing sustainable plant ecosystem productivity. Rhizosphere 3: 233–243
AH Ahkami, R Allen White, PP Handakumbura, C Jansson
392017
Evolutionary variation in MADS box dimerization affects floral development and protein abundance in maize
MJ Abraham-Juárez, A Schrager-Lavelle, J Man, C Whipple, ...
Plant Cell 32 (11), 3408-3424, 2020
332020
Metabotyping as a stopover in genome-to-phenome mapping
PP Handakumbura, B Stanfill, A Rivas-Ubach, D Fortin, JP Vogel, ...
Scientific reports 9 (1), 1858, 2019
272019
Activation of the plant mevalonate pathway by extracellular ATP
SH Cho, K Tóth, D Kim, PH Vo, CH Lin, PP Handakumbura, AR Ubach, ...
Nature Communications 13 (1), 450, 2022
202022
Correlative surface imaging reveals chemical signatures for bacterial hotspots on plant roots
W Liu, L Huang, R Komorek, PP Handakumbura, Y Zhou, D Hu, ...
Analyst 145 (2), 393-401, 2020
202020
SECONDARY WALL ASSOCIATED MYB1 is a positive regulator of secondary cell wall thickening in Brachypodium distachyon and is not found in the Brassicaceae
PP Handakumbura, K Brow, IP Whitney, K Zhao, KA Sanguinet, SJ Lee, ...
The Plant Journal 96 (3), 532-545, 2018
182018
Distinct Preflowering Drought Tolerance Strategies of Sorghum bicolor Genotype RTx430 Revealed by Subcellular Protein Profiling
AJ Ogden, S Abdali, KM Engbrecht, M Zhou, PP Handakumbura
International Journal of Molecular Sciences 21 (24), 9706, 2020
112020
High Temperature Acclimation of Leaf Gas Exchange, Photochemistry, and Metabolomic Profiles in Populus trichocarpa
RA Dewhirst, P Handakumbura, CS Clendinen, E Arm, K Tate, W Wang, ...
ACS Earth and Space Chemistry 5 (8), 1813-1828, 2021
82021
Antecedent conditions determine the biogeochemical response of coastal soils to seawater exposure
A Sengupta, JC Stegen, B Bond-Lamberty, A Rivas-Ubach, J Zheng, ...
Soil Biology and Biochemistry 153, 108104, 2021
82021
Plant iTRAQ‐Based Proteomics
PP Handakumbura, KK Hixson, SO Purvine, C Jansson, L Paša‐Tolić
Current protocols in plant biology 2 (2), 158-172, 2017
72017
Visualizing the hidden half: Plant-microbe interactions in the rhizosphere
PP Handakumbura, A Rivas Ubach, AK Battu
Msystems 6 (5), 10.1128/msystems. 00765-21, 2021
62021
Touch-triggered bZIP translocation regulates elongation and secondary wall biosynthesis
JH Coomey, KJM MacKinnon, IW McCahill, PP Handakumbura, ...
bioRxiv, 2021.02. 03.429573, 2021
52021
Understanding the transcriptional regulation of secondary cell wall biosynthesis in the model grass Brachypodium distachyon
P Handakumbura
42014
Emerging sensing, imaging, and computational technologies to scale nano-to macroscale rhizosphere dynamics–Review and research perspectives
AH Ahkami, O Qafoku, T Roose, Q Mou, Y Lu, ZG Cardon, Y Wu, C Chou, ...
Soil Biology and Biochemistry, 109253, 2023
3*2023
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