Yeast creates a niche for symbiotic lactic acid bacteria through nitrogen overflow O Ponomarova, N Gabrielli, DC Sévin, M Mülleder, K Zirngibl, K Bulyha, ... Cell systems 5 (4), 345-357. e6, 2017 | 299 | 2017 |
Bioaccumulation of therapeutic drugs by human gut bacteria M Klünemann, S Andrejev, S Blasche, A Mateus, P Phapale, ... Nature 597 (7877), 533-538, 2021 | 191 | 2021 |
Metabolic cooperation and spatiotemporal niche partitioning in a kefir microbial community S Blasche, Y Kim, RAT Mars, D Machado, M Maansson, E Kafkia, ... Nature Microbiology 6 (2), 196-208, 2021 | 167 | 2021 |
Metabolic shifts in residual breast cancer drive tumor recurrence KM Havas, V Milchevskaya, K Radic, A Alladin, E Kafkia, M Garcia, ... The Journal of clinical investigation 127 (6), 2091-2105, 2017 | 156 | 2017 |
Laboratory evolution reveals regulatory and metabolic trade-offs of glycerol utilization in Saccharomyces cerevisiae T Strucko, K Zirngibl, F Pereira, E Kafkia, ET Mohamed, M Rettel, F Stein, ... Metabolic engineering 47, 73-82, 2018 | 59 | 2018 |
Riboregulation of Enolase 1 activity controls glycolysis and embryonic stem cell differentiation I Huppertz, JI Perez-Perri, P Mantas, T Sekaran, T Schwarzl, F Russo, ... Molecular Cell 82 (14), 2666-2680. e11, 2022 | 44 | 2022 |
Operation of a TCA cycle subnetwork in the mammalian nucleus E Kafkia, A Andres-Pons, K Ganter, M Seiler, TS Smith, A Andrejeva, ... Science advances 8 (35), eabq5206, 2022 | 31 | 2022 |
Adaptive laboratory evolution of microbial co‐cultures for improved metabolite secretion D Konstantinidis, F Pereira, EM Geissen, K Grkovska, E Kafkia, P Jouhten, ... Molecular systems biology 17 (8), e10189, 2021 | 27 | 2021 |
Glycolytic flux-signaling controls mouse embryo mesoderm development H Miyazawa, MT Snaebjornsson, N Prior, E Kafkia, HM Hammarén, ... Elife 11, e83299, 2022 | 20 | 2022 |
Metabolic cooperation and spatiotemporal niche partitioning in a kefir microbial community. Nat Microbiol 6: 196-208 S Blasche, Y Kim, RAT Mars, D Machado, M Maansson, E Kafkia, ... | 19 | 2021 |
Metabolic memory underlying minimal residual disease in breast cancer K Radic Shechter, E Kafkia, K Zirngibl, S Gawrzak, A Alladin, D Machado, ... Molecular Systems Biology 17 (10), e10141, 2021 | 18 | 2021 |
Model‐guided development of an evolutionarily stable yeast chassis F Pereira, H Lopes, P Maia, B Meyer, J Nocon, P Jouhten, ... Molecular systems biology 17 (7), e10253, 2021 | 7 | 2021 |
Unravelling metabolic cross‐feeding in a yeast–bacteria community using 13C‐based proteomics N Gabrielli, C Maga‐Nteve, E Kafkia, M Rettel, J Loeffler, S Kamrad, ... Molecular Systems Biology 19 (4), e11501, 2023 | 5 | 2023 |
Metabolic memory underlying minimal residual disease in breast cancer KS Radic, E Kafkia, K Zirngibl, S Gawrzak, A Alladin, D Machado, ... Molecular systems biology 17 (10), 2021 | | 2021 |
Uncovering functional metabolic pathways using metabolomics: case studies of mammalian nucleus and dormant cancer cells E Kafkia | | 2020 |