| Pan-cancer analysis of whole genomes Nature 578 (7793), 82-93, 2020 | 1652* | 2020 |
| Pan-cancer analysis of whole genomes identifies driver rearrangements promoted by LINE-1 retrotransposition B Rodriguez-Martin, EG Alvarez, A Baez-Ortega, J Zamora, F Supek, ... Nature genetics 52 (3), 306-319, 2020 | 315 | 2020 |
| Extrachromosomal circular DNA drives oncogenic genome remodeling in neuroblastoma RP Koche, E Rodriguez-Fos, K Helmsauer, M Burkert, IC MacArthur, ... Nature genetics 52 (1), 29-34, 2020 | 233 | 2020 |
| The reference epigenome and regulatory chromatin landscape of chronic lymphocytic leukemia R Beekman, V Chapaprieta, N Russiñol, R Vilarrasa-Blasi, ... Nature medicine 24 (6), 868-880, 2018 | 185 | 2018 |
| Genomic and epigenomic insights into the origin, pathogenesis, and clinical behavior of mantle cell lymphoma subtypes F Nadeu, D Martin-Garcia, G Clot, A Díaz-Navarro, M Duran-Ferrer, ... Blood, The Journal of the American Society of Hematology 136 (12), 1419-1432, 2020 | 162 | 2020 |
| The BLUEPRINT data analysis portal JM Fernández, V de la Torre, D Richardson, R Royo, M Puiggròs, ... Cell systems 3 (5), 491-495. e5, 2016 | 135 | 2016 |
| Enhancer hijacking determines extrachromosomal circular MYCN amplicon architecture in neuroblastoma K Helmsauer, ME Valieva, S Ali, R Chamorro González, R Schöpflin, ... Nature communications 11 (1), 5823, 2020 | 123 | 2020 |
| Re-analysis of public genetic data reveals a rare X-chromosomal variant associated with type 2 diabetes S Bonàs-Guarch, M Guindo-Martínez, I Miguel-Escalada, N Grarup, ... Nature communications 9 (1), 321, 2018 | 115 | 2018 |
| Comprehensive characterization of complex structural variations in cancer by directly comparing genome sequence reads V Moncunill, S Gonzalez, S Beà, LO Andrieux, I Salaverria, C Royo, ... Nature biotechnology 32 (11), 1106-1112, 2014 | 108 | 2014 |
| PGBD5 promotes site-specific oncogenic mutations in human tumors AG Henssen, R Koche, J Zhuang, E Jiang, C Reed, A Eisenberg, E Still, ... Nature genetics 49 (7), 1005-1014, 2017 | 87 | 2017 |
| The impact of non-additive genetic associations on age-related complex diseases M Guindo-Martínez, R Amela, S Bonàs-Guarch, M Puiggròs, C Salvoro, ... Nature communications 12 (1), 2436, 2021 | 65 | 2021 |
| TIGER: The gene expression regulatory variation landscape of human pancreatic islets L Alonso, A Piron, I Morán, M Guindo-Martínez, S Bonàs-Guarch, G Atla, ... Cell reports 37 (2), 2021 | 51 | 2021 |
| Somatic signature of brain-specific single nucleotide variations in sporadic Alzheimer's disease A Parcerisas, SE Rubio, A Muhaisen, A Gomez-Ramos, L Pujadas, ... Journal of Alzheimer's Disease 42 (4), 1357-1382, 2014 | 45 | 2014 |
| Insight into genetic predisposition to chronic lymphocytic leukemia from integrative epigenomics HE Speedy, R Beekman, V Chapaprieta, G Orlando, PJ Law, ... Nature Communications 10 (1), 3615, 2019 | 43 | 2019 |
| Identification of novel type 2 diabetes candidate genes involved in the crosstalk between the mitochondrial and the insulin signaling systems JM Mercader, M Puiggros, AV Segrè, E Planet, E Sorianello, D Sebastian, ... PLoS genetics 8 (12), e1003046, 2012 | 34 | 2012 |
| Large-scale uniform analysis of cancer whole genomes in multiple computing environments CK Yung, BD O’Connor, S Yakneen, J Zhang, K Ellrott, K Kleinheinz, ... BioRxiv, 161638, 2017 | 22 | 2017 |
| Pan-cancer analysis of whole genomes reveals driver rearrangements promoted by LINE-1 retrotransposition in human tumours B Rodriguez-Martin, EG Alvarez, A Baez-Ortega, J Zamora, F Supek, ... BioRxiv, 179705, 2017 | 18 | 2017 |
| ReLA, a local alignment search tool for the identification of distal and proximal gene regulatory regions and their conserved transcription factor binding sites S González, B Montserrat-Sentís, F Sánchez, M Puiggròs, E Blanco, ... Bioinformatics 28 (6), 763-770, 2012 | 18 | 2012 |
| A genetic programming approach to feature selection and classification of instantaneous cognitive states R Ramirez, M Puiggros Applications of Evolutionary Computing: EvoWorkshops 2007: EvoCoMnet, EvoFIN …, 2007 | 18 | 2007 |
| Butler enables rapid cloud-based analysis of thousands of human genomes S Yakneen, SM Waszak, M Gertz, JO Korbel Nature biotechnology 38 (3), 288-292, 2020 | 16 | 2020 |
