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Irene Otero-Muras
Irene Otero-Muras
Institute for Integrative Systems Biology. Spanish Council for Scientific Research
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Local dissipative Hamiltonian description of reversible reaction networks
I Otero-Muras, G Szederkényi, AA Alonso, KM Hangos
Systems & Control Letters 57 (7), 554-560, 2008
662008
A systematic approach to plant-wide control based on thermodynamics
LT Antelo, I Otero-Muras, JR Banga, AA Alonso
Computers & chemical engineering 31 (5-6), 677-691, 2007
522007
Stochastic modeling and numerical simulation of gene regulatory networks with protein bursting
M Pájaro, AA Alonso, I Otero-Muras, C Vázquez
Journal of theoretical biology 421, 51-70, 2017
362017
Chemical reaction network theory elucidates sources of multistability in interferon signaling
I Otero-Muras, P Yordanov, J Stelling
PLoS computational biology 13 (4), e1005454, 2017
362017
Multicriteria global optimization for biocircuit design
I Otero-Muras, JR Banga
BMC Systems Biology 8, 113, 2014
352014
Characterizing multistationarity regimes in biochemical reaction networks
I Otero-Muras, JR Banga, AA Alonso
PLoS One 7 (7), e39194, 2012
352012
Contributing to fisheries sustainability by making the best possible use of their resources: the BEFAIR initiative
AA Alonso, LT Antelo, I Otero-Muras, R Pérez-Gálvez
Trends in food science & technology 21 (11), 569-578, 2010
312010
Dynamic multi-compartmental modelling of metal bioaccumulation in fish: Identifiability implications
I Otero-Muras, A Franco-Uría, AA Alonso, E Balsa-Canto
Environmental Modelling & Software 25 (3), 344-353, 2010
282010
Automated design framework for synthetic biology exploiting pareto optimality
I Otero-Muras, JR Banga
ACS Synthetic Biology 6 (7), 1180-1193, 2017
272017
Improved optimization methods for the multiobjective design of bioprocesses
JOH Sendín, I Otero-Muras, AA Alonso, JR Banga
Industrial & engineering chemistry research 45 (25), 8594-8603, 2006
272006
SYNBADm: a tool for optimization-based automated design of synthetic gene circuits
I Otero-Muras, D Henriques, JR Banga
Bioinformatics 32 (21), 3360-3362, 2016
262016
Design principles of biological oscillators through optimization: forward and reverse analysis
I Otero-Muras, JR Banga
PLoS One 11 (12), e0166867, 2016
242016
Dynamic analysis and control of biochemical reaction networks
I Otero-Muras, G Szederkényi, KM Hangos, AA Alonso
Mathematics and Computers in Simulation 79 (4), 999-1009, 2008
232008
Generic parameterization for a pharmacokinetic model to predict Cd concentrations in several tissues of different fish species
A Franco-Uria, I Otero-Muras, E Balsa-Canto, AA Alonso, E Roca
Chemosphere 79 (4), 377-386, 2010
202010
Exploring multiplicity conditions in enzymatic reaction networks
I Otero‐Muras, JR Banga, AA Alonso
Biotechnology progress 25 (3), 619-631, 2009
202009
Dynamic analysis and control of chemical and biochemical reaction networks
I Otero-Muras, G Szederkényi, AA Alonso, KM Hangos
IFAC Proceedings Volumes 39 (2), 165-170, 2006
152006
Automated engineering of synthetic metabolic pathways for efficient biomanufacturing
I Otero-Muras, P Carbonell
Metabolic Engineering 63, 61-80, 2021
142021
A method for inverse bifurcation of biochemical switches: inferring parameters from dose response curves
I Otero-Muras, P Yordanov, J Stelling
BMC systems biology 8 (1), 1-16, 2014
122014
Transient hysteresis and inherent stochasticity in gene regulatory networks
M Pájaro, I Otero-Muras, C Vázquez, AA Alonso
Nature communications 10 (1), 1-7, 2019
112019
SELANSI: a toolbox for simulation of stochastic gene regulatory networks
M Pájaro, I Otero-Muras, C Vázquez, AA Alonso
Bioinformatics 34 (5), 893-895, 2018
102018
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Artículos 1–20