Claude Pasquier

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STAVROS HAMODRAKASVerified email at biol.uoa.gr
Vasilis J. PromponasAssοciate Professor in Bioinformatics, University of Cyprus, Nicosia, CyprusVerified email at ucy.ac.cy
Nicolas PasquierUniversité Côte d'Azur, Laboratoire I3SVerified email at i3s.unice.fr
Frédéric FlouvatAssociate Professor of Computer Science, University of New CaledoniaVerified email at univ-nc.nc
Didier ParigotInriaVerified email at inria.fr
Theo LiakopoulosUCGVerified email at ucg.gr
Jean-Francois BoulicautINSA Lyon, LIRIS CNRS UMR 5205Verified email at insa-lyon.fr
Julien GardèsBiomandaVerified email at biomanda.com
Miguel AndradeJohannes-Gutenberg University in MainzVerified email at uni-mainz.de
Sophia TsokaKing's College LondonVerified email at kcl.ac.uk
Isidore RigoutsosRichard W. Hevner Professor of Computational Medicine, Director Computational Medicine CenterVerified email at jefferson.edu
Chris SanderDana-Farber Cancer Institute, Harvard Medical School, Broad Institute, Memorial Sloan KetteringVerified email at sanderlab.org
Christos Α. OuzounisAUTH, Thessalonica, Greece • CERTH, Thessalonica, GreeceVerified email at csd.auth.gr
Alfonso ValenciaICREA Professor. Barcelona Supercomputing Center.Verified email at bsc.es
Anton EnrightGroup Leader, Department of Pathology, University of CambridgeVerified email at cam.ac.uk
David MA MartinSenior Lecturer in Bioinformatics, University of DundeeVerified email at dundee.ac.uk
Anna TramontanoSapienza University - Department of PhysicsVerified email at uniroma1.it
Ioannis IliopoulosAssociate Professor Medical School University of CreteVerified email at med.uoc.gr
Javier TamamesCNB-CSICVerified email at cnb.csic.es
Denis PallezAssociate Professor in Computer Science, Université Côte d'AzurVerified email at unice.fr

Claude Pasquier

Université Côte d’Azur, CNRS, I3S, France

Verified email at univ-cotedazur.fr - Homepage

Data Mining Machine Learning Bioinformatics Computational Biology


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A novel method for predicting transmembrane segments in proteins based on a statistical analysis of the SwissProt database: the PRED-TMR algorithm C Pasquier, VJ Promponas, GA Palaios, JS Hamodrakas, SJ Hamodrakas Protein engineering 12 (5), 381-385, 1999	199	1999
Evaluation of annotation strategies using an entire genome sequence I Iliopoulos, S Tsoka, MA Andrade, AJ Enright, M Carroll, P Poullet, ... Bioinformatics 19 (6), 717, 2003	114	2003
Prediction of miRNA-disease associations with a vector space model C Pasquier, J Gardès Scientific Reports 6 (27036), 2016	86	2016
An hierarchical artificial neural network system for the classification of transmembrane proteins C Pasquier, SJ Hamodrakas Protein engineering 12 (8), 631-634, 1999	86	1999
GenMiner: mining non-redundant association rules from integrated gene expression data and annotations R Martinez, N Pasquier, C Pasquier Bioinformatics 24 (22), 2643-2644, 2008	71	2008
Biological data integration using Semantic Web technologies C Pasquier Biochimie 90 (4), 584-594, 2008	71	2008
PRED‐CLASS: Cascading neural networks for generalized protein classification and genome‐wide applications C Pasquier, VJ Promponas, SJ Hamodrakas Proteins: Structure, Function, and Bioinformatics 44 (3), 361-369, 2001	50	2001
Single document keyphrase extraction using sentence clustering and Latent Dirichlet Allocation C Pasquier 5th International Workshop on Semantic Evaluation, 154-157, 2010	45	2010
GenMiner: mining informative association rules from genomic data R Martinez, C Pasquier, N Pasquier 2007 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2007	41	2007
THEA: ontology-driven analysis of microarray data C Pasquier, F Girardot, K Jevardat de Fombelle, R Christen Bioinformatics 20 (16), 2636-2643, 2004	41	2004
SmartTools: A generator of interactive environments tools I Attali, C Courbis, P Degenne, A Fau, D Parigot, C Pasquier International Conference on Compiler Construction (CC'01), LNCS 2027, 355-360, 2001	38	2001
SmartTools: a development environment generator based on XML technologies I Attali, C Courbis, P Degenne, A Fau, J Fillon, D Parigot, C Pasquier, ... XML Technologies and Software Engineering, 2001	28	2001
A novel tool for the prediction of transmembrane protein topology based on a statistical analysis of the SwissProt database: the OrienTM algorithm TD Liakopoulos, C Pasquier, SJ Hamodrakas Protein engineering 14 (6), 387-390, 2001	26	2001
Mining gene expression data using domain knowledge N Pasquier, C Pasquier, L Brisson, M Collard International Journal of Software and Informatics (IJSI) 2 (2), 215-231, 2008	25*	2008
A web server to locate periodicities in a sequence CM Pasquier, VI Promponas, NJ Varvayannis, SJ Hamodrakas Bioinformatics (Oxford, England) 14 (8), 749-750, 1998	25	1998
Aspect and xml-oriented semantic framework generator: Smarttools D Parigot, C Courbis, P Degenne, A Fau, C Pasquier, J Fillon, C Held, ... Electronic Notes in Theoretical Computer Science 65 (3), 97-116, 2002	24	2002
CoPreTHi: a Web tool which combines transmembrane protein segment prediction methods VJ Promponas, GA Palaios, CM Pasquier, JS Hamodrakas, ... In silico biology 1 (3), 159-162, 1999	22	1999
Frequent pattern mining in attributed trees: algorithms and applications C Pasquier, J Sanhes, F Flouvat, N Selmaoui-Folcher Knowledge and Information Systems 46 (3), 491-514, 2016	19	2016
Computational search of hybrid human/SARS-CoV-2 dsRNA reveals unique viral sequences that diverge from those of other coronavirus strains C Pasquier, A Robichon Heliyon 7 (6), e07284, 2021	15*	2021
Environmentally Selected Aphid Variants in Clonality Context Display Differential Patterns of Methylation in the Genome C Pasquier, M Clément, A Dombrovsky, S Penaud, M Da Rocha, ... PloS one 9 (12), e115022, 2014	13	2014

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