| Regulatory network of Escherichia coli: consistency between literature knowledge and microarray profiles RM Gutierrez-Rios, DA Rosenblueth, JA Loza, AM Huerta, JD Glasner, ... Genome research 13 (11), 2435-2443, 2003 | 144 | 2003 |
| The repABC plasmid family MA Cevallos, R Cervantes-Rivera, RM Gutiérrez-Ríos Plasmid 60 (1), 19-37, 2008 | 141 | 2008 |
| Modular analysis of the transcriptional regulatory network of E. coli O Resendis-Antonio, JA Freyre-Gonzalez, R Menchaca-Mendez, ... TRENDS in Genetics 21 (1), 16-20, 2005 | 115 | 2005 |
| The CRISPR/Cas immune system is an operon regulated by LeuO, H-NS, and leucine-responsive regulatory protein in Salmonella enterica serovar Typhi L Medina-Aparicio, JE Rebollar-Flores, AL Gallego-Hernández, ... Journal of bacteriology 193 (10), 2396-2407, 2011 | 102 | 2011 |
| Identification of regulatory network topological units coordinating the genome-wide transcriptional response to glucose in Escherichia coli RM Gutierrez-Ríos, JA Freyre-Gonzalez, O Resendis, J Collado-Vides, ... BMC microbiology 7 (1), 1-18, 2007 | 69 | 2007 |
| New insights into the regulatory networks of paralogous genes in bacteria MA Martínez-Núñez, E Perez-Rueda, RM Gutiérrez-Ríos, E Merino Microbiology 156 (1), 14-22, 2010 | 39 | 2010 |
| Analysis of sequencing strategies and tools for taxonomic annotation: defining standards for progressive metagenomics A Escobar-Zepeda, EE Godoy-Lozano, L Raggi, L Segovia, E Merino, ... Scientific reports 8 (1), 1-13, 2018 | 37 | 2018 |
| DNA microarray for detection of gastrointestinal viruses MA Martínez, M de los Dolores Soto-del, RM Gutiérrez, CY Chiu, ... Journal of clinical microbiology 53 (1), 136-145, 2015 | 37 | 2015 |
| Environmental conditions and transcriptional regulation in Escherichia coli: a physiological integrative approach A Martínez‐Antonio, H Salgado, S Gama‐Castro, RM Gutiérrez‐Ríos, ... Biotechnology and bioengineering 84 (7), 743-749, 2003 | 27 | 2003 |
| Lessons from the modular organization of the transcriptional regulatory network of Bacillus subtilis JA Freyre-González, AM Manjarrez-Casas, E Merino, M Martinez-Nuñez, ... BMC systems biology 7 (1), 1-14, 2013 | 26 | 2013 |
| Networks of transcriptional regulation encoded in a grammatical model J Collado-Vides, RM Gutièrrez-Rı́os, G Bel-Enguix BioSystems 47 (1-2), 103-118, 1998 | 23 | 1998 |
| Bacterial diversity and the geochemical landscape in the southwestern Gulf of Mexico EE Godoy-Lozano, A Escobar-Zepeda, L Raggi, E Merino, ... Frontiers in microbiology 9, 2528, 2018 | 19 | 2018 |
| Global transcriptomic analysis of an engineered Escherichia coli strain lacking the phosphoenolpyruvate: carbohydrate phosphotransferase system during shikimic acid production … L Cortés-Tolalpa, RM Gutiérrez-Ríos, LM Martínez, R de Anda, G Gosset, ... Microbial cell factories 13 (1), 1-20, 2014 | 18 | 2014 |
| The Salmonella enterica serovar Typhi ltrR‐ompR‐ompC‐ompF genes are involved in resistance to the bile salt sodium deoxycholate and in bacterial … JM Villarreal, N Becerra‐Lobato, JE Rebollar‐Flores, L Medina‐Aparicio, ... Molecular microbiology 92 (5), 1005-1024, 2014 | 17 | 2014 |
| Prokaryotic regulatory systems biology: Common principles governing the functional architectures of Bacillus subtilis and Escherichia coli unveiled by the natural decomposition … JA Freyre-González, LG Treviño-Quintanilla, IA Valtierra-Gutiérrez, ... Journal of biotechnology 161 (3), 278-286, 2012 | 12 | 2012 |
| Analysis of Spo0M function in Bacillus subtilis LA Vega-Cabrera, A Guerrero, JL Rodríguez-Mejía, ML Tabche, ... PloS one 12 (2), e0172737, 2017 | 11 | 2017 |
| Transcriptional profiling of fetal hypothalamic TRH neurons M Guerra-Crespo, C Pérez-Monter, SC Janga, S Castillo-Ramírez, ... BMC genomics 12 (1), 1-13, 2011 | 10 | 2011 |
| GETools: gene expression tool for analysis of transcriptome experiments in E. coli AM Huerta, JD Glasner, RM Gutiérrez-Rı́os, FR Blattner, J Collado-Vides TRENDS in Genetics 18 (4), 217-218, 2002 | 10 | 2002 |
| CRISPR-Cas system presents multiple transcriptional units including antisense RNAs that are expressed in minimal medium and upregulated by pH in Salmonella enterica serovar Typhi L Medina-Aparicio, JE Rebollar-Flores, AA Beltrán-Luviano, A Vázquez, ... Microbiology 163 (2), 253-265, 2017 | 9 | 2017 |
| Identification of network topological units coordinating the global expression response to glucose in Bacillus subtilis and its comparison to Escherichia coli CD Vázquez, JA Freyre-González, G Gosset, JA Loza, RM Gutiérrez-Ríos BMC microbiology 9 (1), 1-14, 2009 | 9 | 2009 |
Julio Collado-VidesProfessor of Computational Genomics, CCG, UNAMDirección de correo verificada de ccg.unam.mx
