Denis Thieffry
Denis Thieffry
Professor of Systems Biology, Institut de Biologie de l'Ecole Normale Supérieure (IBENS), Paris
Dirección de correo verificada de ens.fr
TítuloCitado porAño
Dynamical behaviour of biological regulatory networks—I. Biological role of feedback loops and practical use of the concept of the loop-characteristic state
R Thomas, D Thieffry, M Kaufman
Bulletin of mathematical biology 57 (2), 247-276, 1995
6211995
From specific gene regulation to genomic networks: a global analysis of transcriptional regulation in Escherichia coli
D Thieffry, AM Huerta, E Pérez‐Rueda, J Collado‐Vides
Bioessays 20 (5), 433-440, 1998
5731998
Dynamical analysis of a generic Boolean model for the control of the mammalian cell cycle
A Fauré, A Naldi, C Chaouiya, D Thieffry
Bioinformatics 22 (14), e124-e131, 2006
5512006
GOToolBox: functional analysis of gene datasets based on Gene Ontology
D Martin, C Brun, E Remy, P Mouren, D Thieffry, B Jacq
Genome biology 5 (12), R101, 2004
4202004
Genetic control of flower morphogenesis in Arabidopsis thaliana: a logical analysis.
L Mendoza, D Thieffry, ER Alvarez-Buylla
Bioinformatics (Oxford, England) 15 (7), 593-606, 1999
3551999
Dynamical behaviour of biological regulatory networks—II. Immunity control in bacteriophage lambda
D Thieffry, R Thomas
Bulletin of mathematical biology 57 (2), 277-297, 1995
2821995
A logical analysis of the Drosophila gap-gene system
L Sánchez, D Thieffry
Journal of theoretical Biology 211 (2), 115-141, 2001
2532001
RSAT 2011: regulatory sequence analysis tools
M Thomas-Chollier, M Defrance, A Medina-Rivera, O Sand, C Herrmann, ...
Nucleic acids research 39 (suppl_2), W86-W91, 2011
2502011
RegulonDB: A database on transcriptional regulation in Escherichia coli
AM Huerta, H Salgado, D Thieffry, J Collado-Vides
Nucleic acids research 26 (1), 55-59, 1998
2131998
RSAT 2015: regulatory sequence analysis tools
A Medina-Rivera, M Defrance, O Sand, C Herrmann, ...
Nucleic acids research 43 (W1), W50-W56, 2015
2042015
Graphic requirements for multistability and attractive cycles in a Boolean dynamical framework
É Remy, P Ruet, D Thieffry
Advances in Applied Mathematics 41 (3), 335-350, 2008
2022008
Modeling ERBB receptor-regulated G1/S transition to find novel targets for de novo trastuzumab resistance
Ö Sahin, H Fröhlich, C Löbke, U Korf, S Burmester, M Majety, J Mattern, ...
BMC systems biology 3 (1), 1, 2009
2012009
RSAT peak-motifs: motif analysis in full-size ChIP-seq datasets
M Thomas-Chollier, C Herrmann, M Defrance, O Sand, D Thieffry, ...
Nucleic acids research 40 (4), e31-e31, 2012
1922012
Qualitative analysis of gene networks
D Thieffry, R Thomas
World Scientific, 1997
1881997
Logical modelling of regulatory networks with GINsim 2.3
A Naldi, D Berenguier, A Fauré, F Lopez, D Thieffry, C Chaouiya
Biosystems 97 (2), 134-139, 2009
1622009
Mathematical modelling of cell-fate decision in response to death receptor engagement
L Calzone, L Tournier, S Fourquet, D Thieffry, B Zhivotovsky, E Barillot, ...
PLoS computational biology 6 (3), 2010
1612010
GINsim: a software suite for the qualitative modelling, simulation and analysis of regulatory networks
AG Gonzalez, A Naldi, L Sanchez, D Thieffry, C Chaouiya
Biosystems 84 (2), 91-100, 2006
1592006
C/EBPα poises B cells for rapid reprogramming into induced pluripotent stem cells
B Di Stefano, JL Sardina, C van Oevelen, S Collombet, EM Kallin, ...
Nature 506 (7487), 235-239, 2014
1582014
Diversity and plasticity of Th cell types predicted from regulatory network modelling
A Naldi, J Carneiro, C Chaouiya, D Thieffry
PLoS computational biology 6 (9), 2010
1392010
Integrative modelling of the influence of MAPK network on cancer cell fate decision
L Grieco, L Calzone, I Bernard-Pierrot, F Radvanyi, B Kahn-Perles, ...
PLoS computational biology 9 (10), 2013
1212013
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Artículos 1–20