Rachel Karchin

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Noushin NiknafsResearch Associate, Johns Hopkins UniversityDirección de correo verificada de jhu.edu
Valsamo AnagnostouJohns Hopkins School of MedicineDirección de correo verificada de jhmi.edu
Xiaoshan (Melody) ShaoJohns Hopkins UniversityDirección de correo verificada de jhmi.edu
Anne Marie LennonJohns Hopkins UniversityDirección de correo verificada de jhmi.edu
Nicholas J. RobertsAssistant Professor, Department of Pathology, the Johns Hopkins UniversityDirección de correo verificada de jhmi.edu
Carlo CastellaniDirigente Medico, Istituto GasliniDirección de correo verificada de gaslini.org
Christopher L.WolfgangNYU Grossman School of MedicineDirección de correo verificada de NYULangone.org
Cristian TomasettiCity of HopeDirección de correo verificada de coh.org
Christine A. Iacobuzio-DonahueMSKCCDirección de correo verificada de mskcc.org
Marcelo Alex de CarvalhoProfessor, Instituto Federal do Rio de JaneiroDirección de correo verificada de ifrj.edu.br
Jin HeJohns Hopkins University School of MedicineDirección de correo verificada de jhmi.edu
James Robert White PhDResphera BiosciencesDirección de correo verificada de respherabio.com
I.K. Ashok SivakumarJohns Hopkins UniversityDirección de correo verificada de jhu.edu
Alvin P. Makohon-MooreHackensack Meridian Health Center for Discovery and InnovationDirección de correo verificada de hmh-cdi.org
Peter ChianchianoJohns Hopkins University School of MedicineDirección de correo verificada de jhmi.edu
D.Williams ParsonsBaylor College of MedicineDirección de correo verificada de bcm.edu
Robert B. ScharpfJohns Hopkins UniversityDirección de correo verificada de jhsph.edu
Sean TavtigianProfessor of Oncological Science, University of UtahDirección de correo verificada de hci.utah.edu
Eric Thayne MonsonUniversity of UtahDirección de correo verificada de hsc.utah.edu
Jun YuTianjin Medical University Cancer Institute and HospitalDirección de correo verificada de tjmuch.com

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Rachel Karchin

Professor of Biomedical Engineering, Oncology and Computer Science, Johns Hopkins University

Dirección de correo verificada de jhu.edu - Página principal

computational immuno-oncology bioinformatics computational biology computational genomics


Título Ordenar por citas Ordenar por año Ordenar por título	Citado por Citado por	Año
An integrated genomic analysis of human glioblastoma multiforme DW Parsons, S Jones, X Zhang, JCH Lin, RJ Leary, P Angenendt, ... science 321 (5897), 1807-1812, 2008	6832	2008
Integrated genomic analyses of ovarian carcinoma Cancer Genome Atlas Research Network Nature 474 (7353), 609, 2011	6798	2011
Core signaling pathways in human pancreatic cancers revealed by global genomic analyses S Jones, X Zhang, DW Parsons, JCH Lin, RJ Leary, P Angenendt, ... science 321 (5897), 1801-1806, 2008	4603	2008
The genomic landscapes of human breast and colorectal cancers LD Wood, DW Parsons, S Jones, J Lin, T Sjoblom, RJ Leary, D Shen, ... Science 318 (5853), 1108-1113, 2007	3749	2007
Comprehensive characterization of cancer driver genes and mutations MH Bailey, C Tokheim, E Porta-Pardo, S Sengupta, D Bertrand, ... Cell 173 (2), 371-385. e18, 2018	2132	2018
Accumulation of driver and passenger mutations during tumor progression I Bozic, T Antal, H Ohtsuki, H Carter, D Kim, S Chen, R Karchin, ... Proceedings of the National Academy of Sciences 107 (43), 18545-18550, 2010	936	2010
Evolution of neoantigen landscape during immune checkpoint blockade in non–small cell lung cancer V Anagnostou, KN Smith, PM Forde, N Niknafs, R Bhattacharya, J White, ... Cancer discovery 7 (3), 264-276, 2017	822	2017
The genetic landscape of the childhood cancer medulloblastoma DW Parsons, M Li, X Zhang, S Jones, RJ Leary, JCH Lin, SM Boca, ... science 331 (6016), 435-439, 2011	808	2011
Exome sequencing identifies frequent inactivating mutations in BAP1, ARID1A and PBRM1 in intrahepatic cholangiocarcinomas Y Jiao, TM Pawlik, RA Anders, FM Selaru, MM Streppel, DJ Lucas, ... Nature genetics 45 (12), 1470-1473, 2013	688	2013
Defining the disease liability of variants in the cystic fibrosis transmembrane conductance regulator gene PR Sosnay, KR Siklosi, F Van Goor, K Kaniecki, H Yu, N Sharma, ... Nature genetics 45 (10), 1160-1167, 2013	676	2013
High grade serous ovarian carcinomas originate in the fallopian tube SI Labidi-Galy, E Papp, D Hallberg, N Niknafs, V Adleff, M Noe, ... Nature communications 8 (1), 1093, 2017	671	2017
Whole-exome sequencing of neoplastic cysts of the pancreas reveals recurrent mutations in components of ubiquitin-dependent pathways J Wu, Y Jiao, M Dal Molin, A Maitra, RF De Wilde, LD Wood, JR Eshleman, ... Proceedings of the National Academy of Sciences 108 (52), 21188-21193, 2011	662	2011
Cancer-specific high-throughput annotation of somatic mutations: computational prediction of driver missense mutations H Carter, S Chen, L Isik, S Tyekucheva, VE Velculescu, KW Kinzler, ... Cancer research 69 (16), 6660-6667, 2009	543	2009
MODBASE: a database of annotated comparative protein structure models and associated resources U Pieper, N Eswar, FP Davis, H Braberg, MS Madhusudhan, A Rossi, ... Nucleic acids research 34 (suppl_1), D291-D295, 2006	530	2006
Identifying Mendelian disease genes with the variant effect scoring tool H Carter, C Douville, PD Stenson, DN Cooper, R Karchin BMC genomics 14, 1-16, 2013	516	2013
The genomic landscape of response to EGFR blockade in colorectal cancer A Bertotti, E Papp, S Jones, V Adleff, V Anagnostou, B Lupo, M Sausen, ... Nature 526 (7572), 263-267, 2015	455	2015
A combination of molecular markers and clinical features improve the classification of pancreatic cysts S Springer, Y Wang, M Dal Molin, DL Masica, Y Jiao, I Kinde, A Blackford, ... Gastroenterology 149 (6), 1501-1510, 2015	439	2015
Classifying G-protein coupled receptors with support vector machines R Karchin, K Karplus, D Haussler Bioinformatics 18 (1), 147-159, 2002	376	2002
Evaluating the evaluation of cancer driver genes CJ Tokheim, N Papadopoulos, KW Kinzler, B Vogelstein, R Karchin Proceedings of the National Academy of Sciences 113 (50), 14330-14335, 2016	369	2016
Combining local‐structure, fold‐recognition, and new fold methods for protein structure prediction K Karplus, R Karchin, J Draper, J Casper, Y Mandel‐Gutfreund, ... Proteins: Structure, Function, and Bioinformatics 53 (S6), 491-496, 2003	366	2003

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