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Matteo Mori
Matteo Mori
University of California San Diego
Dirección de correo verificada de ucsd.edu
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Año
Constrained allocation flux balance analysis
M Mori, T Hwa, OC Martin, A De Martino, E Marinari
PLoS computational biology 12 (6), e1004913, 2016
1732016
Quantifying the benefit of a proteome reserve in fluctuating environments
M Mori, S Schink, DW Erickson, U Gerland, T Hwa
Nature communications 8 (1), 1225, 2017
1252017
From coarse to fine: the absolute Escherichia coli proteome under diverse growth conditions
M Mori, Z Zhang, A Banaei‐Esfahani, JB Lalanne, H Okano, BC Collins, ...
Molecular systems biology 17 (5), e9536, 2021
852021
Disruption of transcription–translation coordination in Escherichia coli leads to premature transcriptional termination
M Zhu, M Mori, T Hwa, X Dai
Nature microbiology 4 (12), 2347-2356, 2019
74*2019
Uniform sampling of steady states in metabolic networks: heterogeneous scales and rounding
D De Martino, M Mori, V Parisi
PLoS ONE 10 (4), e0122670, 2013
652013
Counting and correcting thermodynamically infeasible flux cycles in genome-scale metabolic networks
D De Martino, F Capuani, M Mori, A De Martino, E Marinari
Metabolites 3 (4), 946-966, 2013
582013
Principles of gene regulation quantitatively connect DNA to RNA and proteins in bacteria
R Balakrishnan, M Mori, I Segota, Z Zhang, R Aebersold, C Ludwig, ...
Science 378 (6624), eabk2066, 2022
532022
A yield-cost tradeoff governs Escherichia coli's decision between fermentation and respiration in carbon-limited growth
M Mori, E Marinari, A De Martino
npj Systems Biology and Applications 5 (1), 16, 2019
532019
Cellular perception of growth rate and the mechanistic origin of bacterial growth law
C Wu, R Balakrishnan, N Braniff, M Mori, G Manzanarez, Z Zhang, T Hwa
Proceedings of the National Academy of Sciences 119 (20), e2201585119, 2022
392022
On the optimality of the enzyme–substrate relationship in bacteria
H Dourado, M Mori, T Hwa, MJ Lercher
PLoS biology 19 (10), e3001416, 2021
292021
Metabolic complementation in bacterial communities: necessary conditions and optimality
M Mori, M Ponce-de-León, J Peretó, F Montero
Frontiers in microbiology 7, 1553, 2016
192016
Enzyme expression kinetics by Escherichia coli during transition from rich to minimal media depends on proteome reserves
C Wu, M Mori, M Abele, A Banaei-Esfahani, Z Zhang, H Okano, ...
Nature Microbiology 8 (2), 347-359, 2023
112023
Glue function of optimally and overdoped cuprates from inversion of the Raman spectra
L Fanfarillo, M Mori, M Campetella, M Grilli, S Caprara
Journal of Physics: Condensed Matter 28 (6), 065701, 2016
92016
Functional Decomposition of Metabolism allows a system-level quantification of fluxes and protein allocation towards specific metabolic functions
M Mori, C Cheng, BR Taylor, H Okano, T Hwa
Nature Communications 14 (1), 4161, 2023
62023
Determinism and contingency shape metabolic complementation in an endosymbiotic consortium
M Ponce-de-León, D Tamarit, J Calle-Espinosa, M Mori, A Latorre, ...
Frontiers in Microbiology 8, 2290, 2017
62017
The Δ-statistics of uncoventional quarkonium-like resonances
ENM Cirillo, M Mori, AD Polosa
Physics Letters B, 2011
32011
Spatiotemporal development of growth and death zones in expanding bacterial colonies driven by emergent nutrient dynamics
H Kannan, P Sun, T Çağlar, P Yao, BR Taylor, K Sahu, D Ge, M Mori, ...
bioRxiv, 2023.08. 27.554977, 2023
12023
Proteome partitioning constraints on long-term laboratory evolution
M Mori, V Patsalo, JR Williamson, M Scott
bioRxiv, 2023.09. 08.556843, 2023
12023
Determining the correlation between proteostasis and proliferation using a proteome allocation model in mammalian cells
YE Ho, M Mori, T Hwa, EJ Bennett
MOLECULAR BIOLOGY OF THE CELL 29 (26), 2018
2018
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Artículos 1–19