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Daniel Aguilar-Hidalgo
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High-throughput micropatterning platform reveals Nodal-dependent bisection of peri-gastrulation–associated versus preneurulation-associated fate patterning
M Tewary, D Dziedzicka, J Ostblom, L Prochazka, N Shakiba, T Heydari, ...
PLOS Biology 17 (10), e3000081, 2019
452019
A Hh-driven gene network controls specification, pattern and size of the Drosophila simple eyes
D Aguilar-Hidalgo, MA Domínguez-Cejudo, G Amore, A Brockmann, ...
Development 140 (1), 82-92, 2013
412013
A model of the spatio-temporal dynamics of Drosophila eye disc development
P Fried, M Sánchez-Aragón, D Aguilar-Hidalgo, B Lehtinen, F Casares, ...
PLoS computational biology 12 (9), e1005052, 2016
382016
Morphogen gradient scaling by recycling of intracellular Dpp
M Romanova-Michaelides, Z Hadjivasiliou, D Aguilar-Hidalgo, ...
Nature 602 (7896), 287-293, 2022
342022
Critical Point in Self-Organized Tissue Growth
D Aguilar-Hidalgo, S Werner, O Wartlick, M González-Gaitán, ...
Physical Review Letters 120 (19), 198102, 2018
292018
The wing and the eye: a parsimonious theory for scaling and growth control?
M Romanova‐Michaelides, D Aguilar‐Hidalgo, F Jülicher, ...
Wiley Interdisciplinary Reviews: Developmental Biology 4 (6), 591-608, 2015
242015
Growth control in the Drosophila eye disc by the cytokine Unpaired
J Vollmer, P Fried, D Aguilar-Hidalgo, M Sánchez-Aragón, A Iannini, ...
Development 144 (5), 837-843, 2017
232017
IQCELL: A platform for predicting the effect of gene perturbations on developmental trajectories using single-cell RNA-seq data
T Heydari, M A. Langley, CL Fisher, D Aguilar-Hidalgo, S Shukla, ...
PLOS Computational Biology 18 (2), e1009907, 2022
152022
Increased avidity for Dpp/BMP2 maintains the proliferation of progenitors-like cells in the Drosophila eye
M Neto, D Aguilar-Hidalgo, F Casares
Developmental Biology 418 (1), 98-107, 2016
112016
Virtual cells in a virtual microenvironment recapitulate early development-like patterns in human pluripotent stem cell colonies
H Kaul, N Werschler, RD Jones, MM Siu, M Tewary, A Hagner, J Ostblom, ...
Stem Cell Reports 18 (1), 377-393, 2023
92023
Evolutionary Dynamics in Gene Networks and Inference Algorithms
D Aguilar-Hidalgo, MC Lemos, A Córdoba
Computation 3 (1), 99-113, 2015
92015
Toward a study of gene regulatory constraints to morphological evolution of the Drosophila ocellar region
D Aguilar-Hidalgo, D Becerra-Alonso, D García-Morales, F Casares
Development genes and evolution 226 (3), 221-233, 2016
72016
Complex networks evolutionary dynamics using genetic algorithms
D Aguilar-Hidalgo, AC Zurita, MCL Fernández
International Journal of Bifurcation and Chaos 22 (07), 1250156, 2012
72012
Pegasus, a small extracellular peptide enhancing short-range diffusion of Wingless
EG Magny, AI Platero, SA Bishop, JI Pueyo, D Aguilar-Hidalgo, JP Couso
Nature Communications 12 (1), 5660, 2021
62021
Dynamic modes of morphogen transport
D Aguilar Hidalgo, Z Hadjivasilou, M Romanova-Michaelides, ...
arXiv e-prints, arXiv: 1909.13280, 2019
6*2019
Core regulatory network motif underlies the ocellar complex patterning in Drosophila melanogaster
D Aguilar-Hidalgo, MC Lemos, A Córdoba
Physica D: Nonlinear Phenomena 295, 91-102, 2015
62015
Gene regulatory network (GRN) embedded agents connect cellular decision making to human pluripotent stem cell derived germ layer-like pattern formation
H Kaul, N Werschler, M Tewary, A Hagner, J Ostblom, D Aguilar-Hidalgo, ...
bioRxiv, 2020.10. 06.327650, 2020
12020
Patterning, dynamics and evolution in the ocellar complex of the fruit fly
D Aguilar-Hidalgo, F Casares, MC Lemos
Nonlinear Systems, Vol. 2: Nonlinear Phenomena in Biology, Optics and …, 2018
12018
Symmetry-breaking in adherent pluripotent stem cell-derived developmental patterns
D Aguilar-Hidalgo, J Ostblom, MM Siu, B McMaster, T Heydari, ...
bioRxiv, 2022.12. 20.521167, 2022
2022
Control of patterning in human pluripotent stem cell colonies via a Turing system with reactive boundaries
B McMaster, H Kaul, D Aguilar-Hidalgo, P Zandstra
Bulletin of the American Physical Society 65, 2020
2020
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Articles 1–20