Petr Novak
Petr Novak
Research Scientist
Dirección de correo verificada de umbr.cas.cz - Página principal
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RepeatExplorer: a Galaxy-based web server for genome-wide characterization of eukaryotic repetitive elements from next-generation sequence reads
P Novák, P Neumann, J Pech, J Steinhaisl, J Macas
Bioinformatics 29 (6), 792-793, 2013
4662013
Graph-based clustering and characterization of repetitive sequences in next-generation sequencing data
P Novák, P Neumann, J Macas
BMC bioinformatics 11 (1), 1-12, 2010
3762010
Selfish supernumerary chromosome reveals its origin as a mosaic of host genome and organellar sequences
MM Martis, S Klemme, AM Banaei-Moghaddam, FR Blattner, J Macas, ...
Proceedings of the National Academy of Sciences 109 (33), 13343-13346, 2012
1812012
Repeatless and repeat-based centromeres in potato: implications for centromere evolution
Z Gong, Y Wu, A Koblížková, GA Torres, K Wang, M Iovene, P Neumann, ...
The Plant Cell 24 (9), 3559-3574, 2012
1692012
Next Generation Sequencing Reveals Genome Downsizing in Allotetraploid Nicotiana tabacum, Predominantly through the Elimination of Paternally Derived …
S Renny-Byfield, M Chester, A Kovařík, SC Le Comber, MA Grandbastien, ...
Molecular biology and evolution 28 (10), 2843-2854, 2011
1482011
Agglomerative epigenetic aberrations are a common event in human breast cancer
P Novak, T Jensen, MM Oshiro, GS Watts, CJ Kim, BW Futscher
Cancer research 68 (20), 8616, 2008
1472008
Analysis of Global and Absorption, Distribution, Metabolism, and Elimination Gene Expression in the Progressive Stages of Human Nonalcoholic Fatty Liver Disease
AD Lake, P Novak, CD Fisher, JP Jackson, RN Hardwick, DD Billheimer, ...
Drug Metabolism and Disposition 39 (10), 1954-1960, 2011
1372011
Epigenetic remodeling during arsenical-induced malignant transformation
TJ Jensen, P Novak, KE Eblin, AJ Gandolfi, BW Futscher
Carcinogenesis 29 (8), 1500-1508, 2008
1302008
Epigenetic inactivation of the HOXA gene cluster in breast cancer
P Novak, T Jensen, MM Oshiro, RJ Wozniak, M Nouzova, GS Watts, ...
Cancer research 66 (22), 10664-10670, 2006
1272006
Stepwise DNA methylation changes are linked to escape from defined proliferation barriers and mammary epithelial cell immortalization
P Novak, TJ Jensen, JC Garbe, MR Stampfer, BW Futscher
Cancer research 69 (12), 5251, 2009
1202009
TAREAN: a computational tool for identification and characterization of satellite DNA from unassembled short reads
P Novák, L Ávila Robledillo, A Koblížková, I Vrbová, P Neumann, J Macas
Nucleic acids research 45 (12), e111-e111, 2017
1132017
A reference genome for pea provides insight into legume genome evolution
J Kreplak, MA Madoui, P Cápal, P Novák, K Labadie, G Aubert, PE Bayer, ...
Nature Genetics 51 (9), 1411-1422, 2019
1122019
Decreased hepatotoxic bile acid composition and altered synthesis in progressive human nonalcoholic fatty liver disease
AD Lake, P Novak, P Shipkova, N Aranibar, D Robertson, MD Reily, Z Lu, ...
Toxicology and applied pharmacology 268 (2), 132-140, 2013
1092013
Branched chain amino acid metabolism profiles in progressive human nonalcoholic fatty liver disease
AD Lake, P Novak, P Shipkova, N Aranibar, DG Robertson, MD Reily, ...
Amino acids 47 (3), 603-615, 2015
1082015
The adaptive endoplasmic reticulum stress response to lipotoxicity in progressive human nonalcoholic fatty liver disease
AD Lake, P Novak, RN Hardwick, B Flores-Keown, F Zhao, WT Klimecki, ...
toxicological sciences 137 (1), 26-35, 2014
1072014
Next generation sequencing-based analysis of repetitive DNA in the model dioceous plant Silene latifolia
J Macas, E Kejnovský, P Neumann, P Novák, A Koblížková, B Vyskot
PloS one 6 (11), e27335, 2011
1072011
In Depth Characterization of Repetitive DNA in 23 Plant Genomes Reveals Sources of Genome Size Variation in the Legume Tribe Fabeae
J Macas, P Novak, J Pellicer, J Čížková, A Koblížková, P Neumann, ...
PloS one 10 (11), e0143424, 2015
1032015
Analysis of the giant genomes of Fritillaria (Liliaceae) indicates that a lack of DNA removal characterizes extreme expansions in genome size
LJ Kelly, S Renny‐Byfield, J Pellicer, J Macas, P Novák, P Neumann, ...
New Phytologist 208 (2), 596-607, 2015
972015
Stretching the rules: monocentric chromosomes with multiple centromere domains
P Neumann, A Navrátilová, E Schroeder-Reiter, A Koblížková, ...
PLoS genetics 8 (6), e1002777, 2012
972012
Diploidization and genome size change in allopolyploids is associated with differential dynamics of low‐and high‐copy sequences
S Renny‐Byfield, A Kovarik, LJ Kelly, J Macas, P Novak, MW Chase, ...
The Plant Journal 74 (5), 829-839, 2013
932013
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Artículos 1–20