Judith Klein-Seetharaman
Judith Klein-Seetharaman
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Carbon nanotubes degraded by neutrophil myeloperoxidase induce less pulmonary inflammation
VE Kagan, NV Konduru, W Feng, BL Allen, J Conroy, Y Volkov, II Vlasova, ...
Nature nanotechnology 5 (5), 354-359, 2010
6742010
Long-range interactions within a nonnative protein
J Klein-Seetharaman, M Oikawa, SB Grimshaw, J Wirmer, E Duchardt, ...
Science 295 (5560), 1719-1722, 2002
6312002
Cardiolipin externalization to the outer mitochondrial membrane acts as an elimination signal for mitophagy in neuronal cells
CT Chu, J Ji, RK Dagda, JF Jiang, YY Tyurina, AA Kapralov, VA Tyurin, ...
Nature cell biology 15 (10), 1197-1205, 2013
6132013
Oxidized arachidonic and adrenic PEs navigate cells to ferroptosis
VE Kagan, G Mao, F Qu, JPF Angeli, S Doll, C St Croix, HH Dar, B Liu, ...
Nature chemical biology 13 (1), 81-90, 2017
4582017
Evaluation of different biological data and computational classification methods for use in protein interaction prediction
Y Qi, Z Bar‐Joseph, J Klein‐Seetharaman
Proteins: Structure, Function, and Bioinformatics 63 (3), 490-500, 2006
4132006
The enzymatic oxidation of graphene oxide
GP Kotchey, BL Allen, H Vedala, N Yanamala, AA Kapralov, YY Tyurina, ...
ACS nano 5 (3), 2098-2108, 2011
3212011
Mechanistic investigations of horseradish peroxidase-catalyzed degradation of single-walled carbon nanotubes
BL Allen, GP Kotchey, Y Chen, NVK Yanamala, J Klein-Seetharaman, ...
Journal of the American Chemical Society 131 (47), 17194-17205, 2009
2782009
A critical assessment of Mus musculusgene function prediction using integrated genomic evidence
L Peña-Castillo, M Tasan, CL Myers, H Lee, T Joshi, C Zhang, Y Guan, ...
Genome biology 9 (S1), S2, 2008
2752008
Random forest similarity for protein-protein interaction prediction from multiple sources
Y Qi, J Klein-Seetharaman, Z Bar-Joseph
Biocomputing 2005, 531-542, 2005
2282005
Identification of core amino acids stabilizing rhodopsin
AJ Rader, G Anderson, B Isin, HG Khorana, I Bahar, J Klein-Seetharaman
Proceedings of the National Academy of Sciences 101 (19), 7246-7251, 2004
1662004
Prediction of interactions between HIV-1 and human proteins by information integration
O Tastan, Y Qi, JG Carbonell, J Klein-Seetharaman
Biocomputing 2009, 516-527, 2009
1572009
Adsorption of surfactant lipids by single-walled carbon nanotubes in mouse lung upon pharyngeal aspiration
AA Kapralov, WH Feng, AA Amoscato, N Yanamala, K Balasubramanian, ...
ACS nano 6 (5), 4147-4156, 2012
1562012
Protein classification based on text document classification techniques
BYM Cheng, JG Carbonell, J Klein‐Seetharaman
Proteins: Structure, Function, and Bioinformatics 58 (4), 955-970, 2005
1432005
Biodegradation of single‐walled carbon nanotubes by eosinophil peroxidase
FT Andón, AA Kapralov, N Yanamala, W Feng, A Baygan, BJ Chambers, ...
Small 9 (16), 2721-2729, 2013
1392013
Protein complex identification by supervised graph local clustering
Y Qi, F Balem, C Faloutsos, J Klein-Seetharaman, Z Bar-Joseph
Bioinformatics 24 (13), i250-i268, 2008
1362008
Structure and function in rhodopsin: Mapping light-dependent changes in distance between residue 316 in helix 8 and residues in the sequence 60− 75, covering the cytoplasmic …
C Altenbach, J Klein-Seetharaman, K Cai, HG Khorana, WL Hubbell
Biochemistry 40 (51), 15493-15500, 2001
1292001
Oxidized lipids block antigen cross-presentation by dendritic cells in cancer
W Cao, R Ramakrishnan, VA Tuyrin, F Veglia, T Condamine, A Amoscato, ...
The Journal of Immunology 192 (6), 2920-2931, 2014
126*2014
Semi-supervised multi-task learning for predicting interactions between HIV-1 and human proteins
Y Qi, O Tastan, JG Carbonell, J Klein-Seetharaman, J Weston
Bioinformatics 26 (18), i645-i652, 2010
1252010
NMR spectroscopy in studies of light-induced structural changes in mammalian rhodopsin: Applicability of solution 19F NMR
J Klein-Seetharaman, EV Getmanova, MC Loewen, PJ Reeves, ...
Proceedings of the National Academy of Sciences 96 (24), 13744-13749, 1999
1251999
A mitochondrial pathway for biosynthesis of lipid mediators
YY Tyurina, SM Poloyac, VA Tyurin, AA Kapralov, J Jiang, ...
Nature chemistry 6 (6), 542-552, 2014
1232014
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