| A rhesus macaque model of Asian-lineage Zika virus infection DM Dudley, MT Aliota, EL Mohr, AM Weiler, G Lehrer-Brey, KL Weisgrau, ... Nature communications 7 (1), 1-9, 2016 | 324 | 2016 |
| Cryptic transmission of SARS-CoV-2 in Washington state T Bedford, AL Greninger, P Roychoudhury, LM Starita, M Famulare, ... Science 370 (6516), 571-575, 2020 | 84 | 2020 |
| Deep sequencing reveals potential antigenic variants at low frequencies in influenza A virus-infected humans JM Dinis, NW Florek, OO Fatola, LH Moncla, JP Mutschler, OK Charlier, ... Journal of virology 90 (7), 3355-3365, 2016 | 73 | 2016 |
| SNPGenie: estimating evolutionary parameters to detect natural selection using pooled next-generation sequencing data CW Nelson, LH Moncla, AL Hughes Bioinformatics 31 (22), 3709-3711, 2015 | 67 | 2015 |
| Selective bottlenecks shape evolutionary pathways taken during mammalian adaptation of a 1918-like avian influenza virus LH Moncla, G Zhong, CW Nelson, JM Dinis, J Mutschler, AL Hughes, ... Cell Host & Microbe 19 (2), 169-180, 2016 | 51 | 2016 |
| Within-host evolution of human influenza virus KS Xue, LH Moncla, T Bedford, JD Bloom Trends in microbiology 26 (9), 781-793, 2018 | 49 | 2018 |
| A novel nonhuman primate model for influenza transmission LH Moncla, TM Ross, JM Dinis, JT Weinfurter, TD Mortimer, ... PloS one 8 (11), e78750, 2013 | 39 | 2013 |
| A single mutation in the VP1 of enterovirus 71 is responsible for increased virulence and neurotropism in adult interferon-deficient mice EA Caine, LH Moncla, MD Ronderos, TC Friedrich, JE Osorio Journal of virology 90 (19), 8592-8604, 2016 | 35 | 2016 |
| A rhesus macaque model of Asian-lineage Zika virus infection. Nat Commun 7: 12204 DM Dudley, MT Aliota, EL Mohr, AM Weiler, G Lehrer-Brey, KL Weisgrau, ... | 25 | 2016 |
| Comprehensive mapping of adaptation of the avian influenza polymerase protein PB2 to humans YQS Soh, LH Moncla, R Eguia, T Bedford, JD Bloom Elife 8, e45079, 2019 | 13 | 2019 |
| Emergence of oseltamivir-resistant H7N9 influenza viruses in immunosuppressed cynomolgus macaques M Kiso, K Iwatsuki-Horimoto, S Yamayoshi, R Uraki, M Ito, N Nakajima, ... The Journal of infectious diseases 216 (5), 582-593, 2017 | 13 | 2017 |
| Comparing viral load and clinical outcomes in Washington State across D614G mutation in spike protein of SARS-CoV-2 C Wagner, P Roychoudhury, J Hadfield, E Hodcroft, J Lee, L Moncla, ... | 11 | 2020 |
| Diversity of influenza A (H5N1) viruses in infected humans, Northern Vietnam, 2004–2010 H Imai, JM Dinis, G Zhong, LH Moncla, TJS Lopes, R McBride, ... Emerging infectious diseases 24 (7), 1128, 2018 | 9 | 2018 |
| Divergent simian arteriviruses cause simian hemorrhagic fever of differing severities in macaques V Wahl-Jensen, JC Johnson, M Lauck, JT Weinfurter, LH Moncla, ... MBio 7 (1), 2016 | 9 | 2016 |
| Influenza evolution: new insights into an old foe LH Moncla, NW Florek, TC Friedrich Trends in microbiology 25 (6), 432-434, 2017 | 7 | 2017 |
| Quantifying within-host diversity of H5N1 influenza viruses in humans and poultry in Cambodia LH Moncla, T Bedford, P Dussart, SV Horm, S Rith, P Buchy, EA Karlsson, ... PLoS pathogens 16 (1), e1008191, 2020 | 6 | 2020 |
| Genomic epidemiology supports multiple introductions and cryptic transmission of Zika virus in Colombia A Black, LH Moncla, K Laiton-Donato, B Potter, L Pardo, A Rico, C Tovar, ... BMC infectious diseases 19 (1), 1-11, 2019 | 6 | 2019 |
| Natural history of Asian lineage Zika virus infection in macaques DM Dudley, MT Aliota, EL Mohr, AM Weiler, G Lehrer-Brey, KL Weisgrau, ... bioRxiv, 046334, 2016 | 5 | 2016 |
| Within-host evolution of simian arteriviruses in crab-eating macaques LH Moncla, AM Weiler, G Barry, JT Weinfurter, JM Dinis, O Charlier, ... Journal of virology 91 (4), 2017 | 2 | 2017 |
| Viral genomes reveal patterns of the SARS-CoV-2 outbreak in Washington State N Müller, C Wagner, C Frazar, P Roychoudhury, J Lee, L Moncla, B Pelle, ... Medrxiv, 2020 | 1 | 2020 |
