| Sequencing wild and cultivated cassava and related species reveals extensive interspecific hybridization and genetic diversity JV Bredeson, JB Lyons, SE Prochnik, GA Wu, CM Ha, ... Nature biotechnology 34 (5), 562-570, 2016 | 399 | 2016 |
| Hemichordate genomes and deuterostome origins O Simakov, T Kawashima, F Marlétaz, J Jenkins, R Koyanagi, T Mitros, ... Nature 527 (7579), 459-465, 2015 | 241 | 2015 |
| Cassava haplotype map highlights fixation of deleterious mutations during clonal propagation P Ramu, W Esuma, R Kawuki, IY Rabbi, C Egesi, JV Bredeson, RS Bart, ... Nature genetics 49 (6), 959-963, 2017 | 199 | 2017 |
| Ancient gene linkages support ctenophores as sister to other animals DT Schultz, SHD Haddock, JV Bredeson, RE Green, O Simakov, ... Nature 618 (7963), 110-117, 2023 | 87 | 2023 |
| Deeply conserved synteny and the evolution of metazoan chromosomes O Simakov, J Bredeson, K Berkoff, F Marletaz, T Mitros, DT Schultz, ... Science advances 8 (5), eabi5884, 2022 | 85 | 2022 |
| Genome biology of the paleotetraploid perennial biomass crop Miscanthus T Mitros, AM Session, BT James, GA Wu, MB Belaffif, LV Clark, S Shu, ... Nature Communications 11 (1), 5442, 2020 | 78 | 2020 |
| A chromosome‐scale reference genome of trifoliate orange (Poncirus trifoliata) provides insights into disease resistance, cold tolerance and genome evolution in Citrus Z Peng, JV Bredeson, GA Wu, S Shu, N Rawat, D Du, S Parajuli, Q Yu, ... The Plant Journal 104 (5), 1215-1232, 2020 | 63 | 2020 |
| QTL Mapping for Pest and Disease Resistance in Cassava and Coincidence of Some QTL with Introgression Regions Derived from Manihot glaziovii I Nzuki, MS Katari, JV Bredeson, E Masumba, F Kapinga, K Salum, ... Frontiers in plant science 8, 1168, 2017 | 61 | 2017 |
| QTL associated with resistance to cassava brown streak and cassava mosaic diseases in a bi-parental cross of two Tanzanian farmer varieties, Namikonga and Albert EA Masumba, F Kapinga, G Mkamilo, K Salum, H Kulembeka, S Rounsley, ... Theoretical and Applied Genetics 130, 2069-2090, 2017 | 53 | 2017 |
| Chromosome evolution and the genetic basis of agronomically important traits in greater yam JV Bredeson, JB Lyons, IO Oniyinde, NR Okereke, O Kolade, I Nnabue, ... Nature communications 13 (1), 2001, 2022 | 45 | 2022 |
| Analysis of muntjac deer genome and chromatin architecture reveals rapid karyotype evolution AB Mudd, JV Bredeson, R Baum, D Hockemeyer, DS Rokhsar Communications biology 3 (1), 480, 2020 | 42 | 2020 |
| Current status and impending progress for cassava structural genomics JB Lyons, JV Bredeson, BN Mansfeld, GJ Bauchet, J Berry, A Boyher, ... Plant Molecular Biology, 1-15, 2021 | 13 | 2021 |
| Genetic analysis and QTL mapping for multiple biotic stress resistance in cassava AL Garcia-Oliveira, B Kimata, S Kasele, F Kapinga, E Masumba, ... PLoS One 15 (8), e0236674, 2020 | 13 | 2020 |
| Conserved chromatin and repetitive patterns reveal slow genome evolution in frogs JV Bredeson, AB Mudd, S Medina-Ruiz, T Mitros, OK Smith, KE Miller, ... Nature Communications 15 (1), 579, 2024 | 11 | 2024 |
| HAPCAD: An open-source tool to detect PCR crossovers in next-generation sequencing generated HLA data SL McDevitt, JV Bredeson, SW Roy, JA Lane, JA Noble Human immunology 77 (3), 257-263, 2016 | 7 | 2016 |
| New insights into Xenopus sex chromosome genomics from the Marsabit clawed frog X. borealis BJ Evans, AB Mudd, JV Bredeson, BLS Furman, DV Wasonga, JB Lyons, ... Journal of evolutionary biology 35 (12), 1777-1790, 2022 | 6 | 2022 |
| Identification and classification of cis-regulatory elements in the amphipod crustacean Parhyale hawaiensis DA Sun, JV Bredeson, HS Bruce, NH Patel Development 149 (11), dev200793, 2022 | 6 | 2022 |
| Cassava HapMap: Masking deleterious mutations in a clonal crop species P Ramu, W Esuma, R Kawuki, IY Rabbi, C Egesi, JV Bredeson, RS Bart, ... bioRxiv, 2016 | 4 | 2016 |
| Muntjac chromosome evolution and architecture AB Mudd, JV Bredeson, R Baum, D Hockemeyer, DS Rokhsar BioRxiv, 772343, 2019 | 3 | 2019 |
| Cassava HapMap: Managing genetic load in a clonal crop species P Ramu, W Esuma, R Kawuki, IY Rabbi, C Egesi, JV Bredeson, RS Bart, ... bioRxiv, 077123, 2016 | 3 | 2016 |
