| Integrated analysis of shotgun proteomic data with PatternLab for proteomics 4.0 PC Carvalho, DB Lima, FV Leprevost, MDM Santos, JSG Fischer, ... Nature protocols 11 (1), 102-117, 2016 | 251 | 2016 |
| PatternLab for proteomics: a tool for differential shotgun proteomics PC Carvalho, JSG Fischer, EI Chen, JR Yates, VC Barbosa BMC bioinformatics 9, 1-14, 2008 | 150 | 2008 |
| Preliminary results from a phase I/II study of perillyl alcohol intranasal administration in adults with recurrent malignant gliomas CO Da Fonseca, G Schwartsmann, J Fischer, J Nagel, D Futuro, ... Surgical neurology 70 (3), 259-266, 2008 | 149 | 2008 |
| Search engine processor: filtering and organizing peptide spectrum matches PC Carvalho, JSG Fischer, T Xu, D Cociorva, TS Balbuena, RH Valente, ... Proteomics 12 (7), 944-949, 2012 | 130 | 2012 |
| PatternLab: from mass spectra to label‐free differential shotgun proteomics PC Carvalho, JSG Fischer, T Xu, JR Yates III, VC Barbosa Current Protocols in Bioinformatics 40 (1), 13.19. 1-13.19. 18, 2012 | 77 | 2012 |
| Long-term outcome in patients with recurrent malignant glioma treated with Perillyl alcohol inhalation CO Da Fonseca, RM Teixeira, JCT Silva, JDESDAG Fischer, OC Meirelles, ... Anticancer research 33 (12), 5625-5631, 2013 | 76 | 2013 |
| Characterization of homodimer interfaces with cross-linking mass spectrometry and isotopically labeled proteins DB Lima, JT Melchior, J Morris, VC Barbosa, J Chamot-Rooke, ... Nature protocols 13 (3), 431-458, 2018 | 54 | 2018 |
| GO Explorer: a gene-ontology tool to aid in the interpretation of shotgun proteomics data PC Carvalho, JSG Fischer, EI Chen, GB Domont, MGC Carvalho, ... Proteome Science 7, 1-11, 2009 | 40 | 2009 |
| Are gastric cancer resection margin proteomic profiles more similar to those from controls or tumors? PF Aquino, JSG Fischer, AGC Neves-Ferreira, J Perales, GB Domont, ... Journal of proteome research 11 (12), 5836-5842, 2012 | 34 | 2012 |
| Simple, efficient and thorough shotgun proteomic analysis with PatternLab V MDM Santos, DB Lima, JSG Fischer, MA Clasen, LU Kurt, ... Nature protocols 17 (7), 1553-1578, 2022 | 33 | 2022 |
| Dynamic proteomic overview of glioblastoma cells (A172) exposed to perillyl alcohol JS da Gama Fischer, L Liao, PC Carvalho, VC Barbosa, GB Domont, ... Journal of proteomics 73 (5), 1018-1027, 2010 | 27 | 2010 |
| A multi-protease, multi-dissociation, bottom-up-to-top-down proteomic view of the Loxosceles intermedia venom D Trevisan-Silva, AV Bednaski, JSG Fischer, SS Veiga, N Bandeira, ... Scientific data 4 (1), 1-7, 2017 | 26 | 2017 |
| Chemo-resistant protein expression pattern of glioblastoma cells (A172) to perillyl alcohol J de Saldanha da Gama Fischer, P Costa Carvalho, CO da Fonseca, ... Journal of proteome research 10 (1), 153-160, 2011 | 25 | 2011 |
| Proteomic Profiling of the Influence of Iron Availability on Cryptococcus gattii J Crestani, PC Carvalho, X Han, A Seixas, L Broetto, JSG Fischer, ... Journal of proteome research 11 (1), 189-205, 2012 | 24 | 2012 |
| Epstein-Barr virus DNA associated with gastric adenocarcinoma and adjacent non-cancerous mucosa in patients from Manaus, Brazil PF De Aquino, PC Carvalho, JS da Gama Fischer, AQ de Souza, ... Genet Mol Res 11 (4), 4442-6, 2012 | 23 | 2012 |
| Exploring the proteomic landscape of a gastric cancer biopsy with the shotgun imaging analyzer PF Aquino, DB Lima, J de Saldanha da Gama Fischer, RD Melani, ... Journal of proteome research 13 (1), 314-320, 2014 | 21 | 2014 |
| Analyzing marginal cases in differential shotgun proteomics PC Carvalho, JSG Fischer, J Perales, JR Yates, VC Barbosa, ... Bioinformatics 27 (2), 275-276, 2011 | 21 | 2011 |
| Anti-thrombin as a prognostic biomarker candidate for patients with recurrent glioblastoma multiform under treatment with perillyl alcohol JS da Gama Fischer, PC Carvalho, AG da Costa Neves-Ferreira, ... J. Exp. Oncol 7, 285-290, 2008 | 17 | 2008 |
| Comparing intestinal versus diffuse gastric cancer using a PEFF-oriented proteomic pipeline HH Wippel, MDM Santos, MA Clasen, LU Kurt, FCS Nogueira, ... Journal of proteomics 171, 63-72, 2018 | 15 | 2018 |
| A time-based and intratumoral proteomic assessment of a recurrent glioblastoma multiforme PF De Aquino, PC Carvalho, FCS Nogueira, CO Da Fonseca, ... Frontiers in Oncology 6, 183, 2016 | 13 | 2016 |
