Alessandro M. Varani
Alessandro M. Varani
UNESP - Sao Paulo State University
Verified email at unesp.br - Homepage
TitleCited byYear
ISsaga is an ensemble of web-based methods for high throughput identification and semi-automatic annotation of insertion sequences in prokaryotic genomes
AM Varani, P Siguier, E Gourbeyre, V Charneau, M Chandler
Genome biology 12 (3), R30, 2011
1882011
Insertion sequence IS26 reorganizes plasmids in clinically isolated multidrug-resistant bacteria by replicative transposition
S He, AB Hickman, AM Varani, P Siguier, M Chandler, JP Dekker, F Dyda
MBio 6 (3), e00762-15, 2015
102*2015
Building the sugarcane genome for biotechnology and identifying evolutionary trends
N De Setta, CB Monteiro-Vitorello, CJ Metcalfe, GMQ Cruz, LE Del Bem, ...
BMC genomics 15 (1), 540, 2014
922014
Everyman's guide to bacterial insertion sequences
P Siguier, E Gourbeyre, A Varani, B Ton-Hoang, M Chandler
Mobile DNA III, 555-590, 2015
80*2015
Xylella and Xanthomonas mobil'omics
CB Monteiro-Vitorello, MC De Oliveira, MM Zerillo, AM Varani, E Civerolo, ...
Omics: a journal of integrative biology 9 (2), 146-159, 2005
572005
Origins of the Xylella fastidiosa prophage-like regions and their impact in genome differentiation
A de Mello Varani, RC Souza, HI Nakaya, WC De Lima, LGP de Almeida, ...
PLoS One 3 (12), 2008
512008
The role of prophage in plant-pathogenic bacteria
AM Varani, CB Monteiro-Vitorello, HI Nakaya, MA Van Sluys
Annual review of phytopathology 51, 429-451, 2013
472013
Exploring bacterial insertion sequences with ISfinder: objectives, uses, and future developments
P Siguier, A Varani, J Perochon, M Chandler
Mobile Genetic Elements, 91-103, 2012
422012
Laterally transferred genomic islands in Xanthomonadales related to pathogenicity and primary metabolism
WC Lima, ACM Paquola, AM Varani, MA Van Sluys, CFM Menck
FEMS microbiology letters 281 (1), 87-97, 2008
422008
NAD biosynthesis evolution in bacteria: lateral gene transfer of kynurenine pathway in Xanthomonadales and Flavobacteriales
WC Lima, AM Varani, CFM Menck
Molecular biology and evolution 26 (2), 399-406, 2009
342009
Comparative analysis of Mutator -like transposases in sugarcane
M Rossi, PG Araujo, EM De Jesus, AM Varani, MA Van Sluys
Molecular Genetics and Genomics 272 (2), 194-203, 2004
322004
A TALE of transposition: Tn3-like transposons play a major role in the spread of pathogenicity determinants of Xanthomonas citri and other xanthomonads
RM Ferreira, ACP de Oliveira, LM Moreira, J Belasque, E Gourbeyre, ...
MBio 6 (1), e02505-14, 2015
292015
Strain-specific polyketide synthase genes of Aspergillus niger
LM Ferracin, CB Fier, MLC Vieira, CB Monteiro-Vitorello, ...
International journal of food microbiology 155 (3), 137-145, 2012
292012
The family bradyrhizobiaceae
JAM de Souza, LM Carrareto Alves, A de Mello Varani, ...
The Prokaryotes, 135-154, 2014
282014
A Metagenomic Approach to Cyanobacterial Genomics
DO Alvarenga, MF Fiore, AM Varani
Frontiers in Microbiology, 2017
242017
The chloroplast genome of Passiflora edulis (Passifloraceae) assembled from long sequence reads: structural organization and phylogenomic studies in Malpighiales
LA Cauz-Santos, CF Munhoz, N Rodde, S Cauet, AA Santos, HA Penha, ...
Frontiers in plant science 8, 334, 2017
242017
The chloroplast genome of Utricularia reniformis sheds light on the evolution of the ndh gene complex of terrestrial carnivorous plants from the Lentibulariaceae family
SR Silva, YCA Diaz, HA Penha, DG Pinheiro, CC Fernandes, ...
PLoS One 11 (10), 2016
232016
The Family Rhizobiaceae
EGML Lucia Maria Carrareto Alves, Jackson Antônio Marcondes de Souza ...
The Prokaryotes: Alphaproteobacteria and Betaproteobacteria, 419-437, 2014
23*2014
A balanced microbiota efficiently produces methane in a novel high-rate horizontal anaerobic reactor for the treatment of swine wastewater
RAO Rose Maria Dudaa, Juliana da Silva Vantini, Larissa Scattolin Martins ...
Bioresource Technology 197 (10.1016/j.biortech.2015.08.004), 152–160, 2015
192015
Mechanisms of evolution in high-consequence drug resistance plasmids
S He, M Chandler, AM Varani, AB Hickman, JP Dekker, F Dyda
MBio 7 (6), e01987-16, 2016
182016
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Articles 1–20