| Walker-A motif acts to coordinate ATP hydrolysis with motor output in viral DNA packaging D Ortiz, M Ordyan, J Sippy, CS Oh, N Keller, M Feiss, CE Catalano, ... Journal of molecular biology 428 (13), 2709-2729, 2016 | 44 | 2016 |
| Nucleotide-dependent DNA gripping and an end-clamp mechanism regulate the bacteriophage T4 viral packaging motor M Ordyan, I Alam, M Mahalingam, VB Rao, DE Smith Nature communications 9 (1), 5434, 2018 | 25 | 2018 |
| Interactions between calmodulin and neurogranin govern the dynamics of CaMKII as a leaky integrator M Ordyan, T Bartol, M Kennedy, P Rangamani, T Sejnowski PLoS computational biology 16 (7), e1008015, 2020 | 17 | 2020 |
| Functional dissection of a viral DNA packaging Machine's Walker B Motif D Ortiz, M Ordyan, J Pajak, J Sippy, A Catala, CS Oh, A Vu, G Arya, ... Journal of molecular biology 431 (22), 4455-4474, 2019 | 15 | 2019 |
| Evidence that a catalytic glutamate and an ‘Arginine Toggle’act in concert to mediate ATP hydrolysis and mechanochemical coupling in a viral DNA packaging motor D Ortiz, D delToro, M Ordyan, J Pajak, J Sippy, A Catala, CS Oh, A Vu, ... Nucleic acids research 47 (3), 1404-1415, 2019 | 15 | 2019 |
| Mcell4 with bionetgen: A Monte Carlo simulator of rule-based reaction-diffusion systems with python interface A Husar, M Ordyan, GC Garcia, JG Yancey, AS Saglam, JR Faeder, ... PLOS Computational Biology 20 (4), e1011800, 2024 | 4 | 2024 |
| A spatial model of autophosphorylation of CaMKII in a glutamatergic spine suggests a network-driven kinetic mechanism for bistable changes in synaptic strength. TM Bartol, M Ordyan, TJ Sejnowski, P Rangamani, MB Kennedy bioRxiv, 2024.02. 02.578696, 2024 | 1 | 2024 |
| Regulation of phage lambda packaging motor-DNA interactions: Nucleotide independent and dependent gripping and friction B Rawson, M Ordyan, Q Yang, J Sippy, M Feiss, CE Catalano, DE Smith bioRxiv, 2022.09. 24.509349, 2022 | 1 | 2022 |
| Probing the phage λ packaging motor’s grip on DNA with optical tweezers and rapid solution exchange B Rawson, M Ordyan, DE Smith Biophysical Journal 121 (3), 425a, 2022 | | 2022 |
| Solution exchange techniques applied to optical tweezers studies of viral DNA packaging B Rawson, M Ordyan, D Smith Optical Trapping and Optical Micromanipulation XVIII 11798, 117982G, 2021 | | 2021 |
| Regulation of Viral Packaging Motors Grip on DNA and Discovery of a DNA “End-Clamp” Mechanism M Ordyan, M Fizari, J Chien, B Rawson, DE Smith Biophysical Journal 118 (3), 75a, 2020 | | 2020 |
| Regulation of a Viral Packaging Motor's Grips on DNA M Ordyan, DE Smith, VB Rao, I Alam, M Mahalingam Biophysical Journal 114 (3), 91a, 2018 | | 2018 |
| Insights on Viral DNA Packaging Motor Mechanisms from the Effects of Motor Residue Changes on Single-Molecule Packaging Dynamics DE Smith, M Ordyan, J Sippy, M Feiss Biophysical Journal 114 (3), 585a, 2018 | | 2018 |
| Insights on viral DNA packaging motor mechanisms from the effects of motor residue changes on single-molecule packaging dynamics M Ordyan, D Deltoro, D Smith APS March Meeting Abstracts 2018, P50. 005, 2018 | | 2018 |
| Regulation of a Viral Packaging Motor's Grip on DNA D Smith, M Ordyan, V Rao, I Alam, M Mahalingam APS March Meeting Abstracts 2018, P50. 004, 2018 | | 2018 |
| Studies of viral DNA packaging motor mechanisms on a single molecule level via optical tweezers M Ordyan University of California, San Diego, 2017 | | 2017 |
Douglas E. SmithProfessor, UC San DiegoCorreu electrònic verificat a ucsd.edu
