Jie Liang
Jie Liang
Verified email at uic.edu
Title
Cited by
Cited by
Year
CASTp: computed atlas of surface topography of proteins with structural and topographical mapping of functionally annotated residues
J Dundas, Z Ouyang, J Tseng, A Binkowski, Y Turpaz, J Liang
Nucleic acids research 34 (suppl_2), W116-W118, 2006
17452006
Anatomy of protein pockets and cavities: measurement of binding site geometry and implications for ligand design
J Liang, C Woodward, H Edelsbrunner
Protein science 7 (9), 1884-1897, 1998
11471998
CASTp: computed atlas of surface topography of proteins
TA Binkowski, S Naghibzadeh, J Liang
Nucleic acids research 31 (13), 3352-3355, 2003
7012003
Analytical shape computation of macromolecules: I. Molecular area and volume through alpha shape
J Liang, H Edelsbrunner, P Fu, PV Sudhakar, S Subramaniam
Proteins: Structure, Function, and Bioinformatics 33 (1), 1-17, 1998
4041998
CASTp 3.0: computed atlas of surface topography of proteins
W Tian, C Chen, X Lei, J Zhao, J Liang
Nucleic acids research 46 (W1), W363-W367, 2018
3912018
On the definition and the construction of pockets in macromolecules
H Edelsbrunner, M Facello, J Liang
Discrete Applied Mathematics 88 (1-3), 83-102, 1998
3081998
Are proteins well-packed?
J Liang, KA Dill
Biophysical journal 81 (2), 751-766, 2001
2952001
Analytical shape computation of macromolecules: II. Inaccessible cavities in proteins
J Liang, H Edelsbrunner, P Fu, PV Sudhakar, S Subramaniam
Proteins: Structure, Function, and Bioinformatics 33 (1), 18-29, 1998
2831998
Protein–protein interactions: hot spots and structurally conserved residues often locate in complemented pockets that pre-organized in the unbound states: implications for docking
X Li, O Keskin, B Ma, R Nussinov, J Liang
Journal of molecular biology 344 (3), 781-795, 2004
2182004
Helix-helix packing and interfacial pairwise interactions of residues in membrane proteins
L Adamian, J Liang
Journal of molecular biology 311 (4), 891-907, 2001
2062001
Inferring functional relationships of proteins from local sequence and spatial surface patterns
TA Binkowski, L Adamian, J Liang
Journal of molecular biology 332 (2), 505-526, 2003
1982003
Interhelical hydrogen bonds and spatial motifs in membrane proteins: polar clamps and serine zippers
L Adamian, J Liang
Proteins: Structure, Function, and Bioinformatics 47 (2), 209-218, 2002
1862002
Ethnic differences and functional analysis of MET mutations in lung cancer
S Krishnaswamy, R Kanteti, JS Duke-Cohan, S Loganathan, W Liu, ...
Clinical Cancer Research 15 (18), 5714-5723, 2009
1772009
Measuring proteins and voids in proteins
H Edelsbrunner, M Facello, P Fu, J Liang
Proceedings of the Twenty-Eighth Annual Hawaii International Conference on …, 1995
1761995
Computation of molecular electrostatics with boundary element methods
J Liang, S Subramaniam
Biophysical journal 73 (4), 1830-1841, 1997
1581997
Predicting protein folding rates from geometric contact and amino acid sequence
Z Ouyang, J Liang
Protein Science 17 (7), 1256-1263, 2008
1252008
topoSNP: a topographic database of non‐synonymous single nucleotide polymorphisms with and without known disease association
NO Stitziel, TA Binkowski, YY Tseng, S Kasif, J Liang
Nucleic acids research 32 (suppl_1), D520-D522, 2004
1182004
Empirical lipid propensities of amino acid residues in multispan alpha helical membrane proteins
L Adamian, V Nanda, WF DeGrado, J Liang
Proteins: Structure, Function, and Bioinformatics 59 (3), 496-509, 2005
1102005
Structural location of disease-associated single-nucleotide polymorphisms
NO Stitziel, YY Tseng, D Pervouchine, D Goddeau, S Kasif, J Liang
Journal of molecular biology 327 (5), 1021-1030, 2003
1052003
Prediction of transmembrane helix orientation in polytopic membrane proteins
L Adamian, J Liang
BMC structural Biology 6 (1), 1-17, 2006
962006
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Articles 1–20