Thibaut Jombart
Thibaut Jombart
London School of Hygiene and Tropical Medicine
Verified email at imperial.ac.uk
Title
Cited by
Cited by
Year
adegenet: a R package for the multivariate analysis of genetic markers
T Jombart
Bioinformatics 24 (11), 1403-1405, 2008
42112008
Discriminant analysis of principal components: a new method for the analysis of genetically structured populations
T Jombart, S Devillard, F Balloux
BMC genetics 11 (1), 1-15, 2010
30682010
Pandemic potential of a strain of influenza A (H1N1): early findings
C Fraser, CA Donnelly, S Cauchemez, WP Hanage, MD Van Kerkhove, ...
science 324 (5934), 1557-1561, 2009
22132009
adegenet 1.3-1: new tools for the analysis of genome-wide SNP data
T Jombart, I Ahmed
Bioinformatics 27 (21), 3070-3071, 2011
15832011
Ebola virus disease in West Africa—the first 9 months of the epidemic and forward projections
WHO Ebola Response Team
New England Journal of Medicine 371 (16), 1481-1495, 2014
15292014
The effect of control strategies to reduce social mixing on outcomes of the COVID-19 epidemic in Wuhan, China: a modelling study
K Prem, Y Liu, TW Russell, AJ Kucharski, RM Eggo, N Davies, S Flasche, ...
The Lancet Public Health 5 (5), e261-e270, 2020
11232020
An Aboriginal Australian genome reveals separate human dispersals into Asia
M Rasmussen, X Guo, Y Wang, KE Lohmueller, S Rasmussen, ...
Science 334 (6052), 94-98, 2011
6942011
How to measure and test phylogenetic signal
T Münkemüller, S Lavergne, B Bzeznik, S Dray, T Jombart, K Schiffers, ...
Methods in Ecology and Evolution 3 (4), 743-756, 2012
5882012
Revealing cryptic spatial patterns in genetic variability by a new multivariate method
T Jombart, S Devillard, AB Dufour, D Pontier
Heredity 101 (1), 92-103, 2008
5002008
Community ecology in the age of multivariate multiscale spatial analysis
S Dray, R Pélissier, P Couteron, MJ Fortin, P Legendre, PR Peres-Neto, ...
Ecological Monographs 82 (3), 257-275, 2012
4452012
Historical variations in mutation rate in an epidemic pathogen, Yersinia pestis
Y Cui, C Yu, Y Yan, D Li, Y Li, T Jombart, LA Weinert, Z Wang, Z Guo, ...
Proceedings of the National Academy of Sciences 110 (2), 577-582, 2013
3322013
Genetic markers in the playground of multivariate analysis
T Jombart, D Pontier, AB Dufour
Heredity 102 (4), 330-341, 2009
3112009
Effectiveness of isolation, testing, contact tracing, and physical distancing on reducing transmission of SARS-CoV-2 in different settings: a mathematical modelling study
AJ Kucharski, P Klepac, AJK Conlan, SM Kissler, ML Tang, H Fry, JR Gog, ...
The Lancet Infectious Diseases 20 (10), 1151-1160, 2020
2692020
Effects of non-pharmaceutical interventions on COVID-19 cases, deaths, and demand for hospital services in the UK: a modelling study
NG Davies, AJ Kucharski, RM Eggo, A Gimma, WJ Edmunds, T Jombart, ...
The Lancet Public Health 5 (7), e375-e385, 2020
2692020
Global, regional, and national estimates of the population at increased risk of severe COVID-19 due to underlying health conditions in 2020: a modelling study
A Clark, M Jit, C Warren-Gash, B Guthrie, HHX Wang, SW Mercer, ...
The Lancet Global Health 8 (8), e1003-e1017, 2020
2532020
hierfstat: estimation and tests of hierarchical F-statistics
J Goudet, T Jombart
R package version 0.04-22 10, 2015
2372015
adespatial: Multivariate multiscale spatial analysis
S Dray, G Blanchet, D Borcard, G Guenard, T Jombart, G Larocque, ...
R package version 0.0-9, 2017
2232017
A timescale for evolution, population expansion, and spatial spread of an emerging clone of methicillin-resistant Staphylococcus aureus
U Nübel, J Dordel, K Kurt, B Strommenger, H Westh, SK Shukla, ...
PLoS Pathog 6 (4), e1000855, 2010
1812010
Bayesian reconstruction of disease outbreaks by combining epidemiologic and genomic data
T Jombart, A Cori, X Didelot, S Cauchemez, C Fraser, N Ferguson
PLoS Comput Biol 10 (1), e1003457, 2014
1762014
A tutorial for discriminant analysis of principal components (DAPC) using adegenet 2.0. 0
T Jombart, C Collins
London: Imperial College London, MRC Centre for Outbreak Analysis and Modelling, 2015
1732015
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Articles 1–20