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Eftychios A. Pnevmatikakis
Eftychios A. Pnevmatikakis
Center for Computational Mathematics, Flatiron Institute, Simons Foundation
Verified email at flatironinstitute.org
Title
Cited by
Cited by
Year
Simultaneous denoising, deconvolution, and demixing of calcium imaging data
EA Pnevmatikakis, D Soudry, Y Gao, TA Machado, J Merel, D Pfau, ...
Neuron 89 (2), 285-299, 2016
8042016
NoRMCorre: An online algorithm for piecewise rigid motion correction of calcium imaging data
EA Pnevmatikakis, A Giovannucci
Journal of Neuroscience Methods 291, 83-94, 2017
4322017
CaImAn an open source tool for scalable calcium imaging data analysis
A Giovannucci, J Friedrich, P Gunn, J Kalfon, BL Brown, SA Koay, ...
Elife 8, e38173, 2019
3782019
Efficient and accurate extraction of in vivo calcium signals from microendoscopic video data
P Zhou, SL Resendez, J Rodriguez-Romaguera, JC Jimenez, SQ Neufeld, ...
elife 7, e28728, 2018
3712018
A robotic multidimensional directed evolution approach applied to fluorescent voltage reporters
KD Piatkevich, EE Jung, C Straub, C Linghu, D Park, HJ Suk, ...
Nature chemical biology 14 (4), 352-360, 2018
2532018
Simultaneous multi-plane imaging of neural circuits
W Yang, JK Miller, L Carrillo-Reid, E Pnevmatikakis, L Paninski, R Yuste, ...
Neuron 89 (2), 269-284, 2016
2122016
Cerebellar granule cells acquire a widespread predictive feedback signal during motor learning
A Giovannucci, A Badura, B Deverett, F Najafi, TD Pereira, Z Gao, I Ozden, ...
Nature neuroscience 20 (5), 727-734, 2017
1482017
Population-level representation of a temporal sequence underlying song production in the zebra finch
MA Picardo, J Merel, KA Katlowitz, D Vallentin, DE Okobi, SE Benezra, ...
Neuron 90 (4), 866-876, 2016
1182016
MULTI-INPUT MULTI-OUTPUT TIME ENCODING AND DECODING MACHINES
AA Lazar, EA Pnevmatikakis
US Patent 20,120,039,399, 2012
852012
Spatiotemporal receptive fields of barrel cortex revealed by reverse correlation of synaptic input
A Ramirez, EA Pnevmatikakis, J Merel, L Paninski, KD Miller, RM Bruno
Nature neuroscience 17 (6), 866-875, 2014
792014
Video time encoding machines
AA Lazar, EA Pnevmatikakis
IEEE Transactions on Neural Networks 22 (3), 461-473, 2011
792011
Bayesian spike inference from calcium imaging data
EA Pnevmatikakis, J Merel, A Pakman, L Paninski
Asilomar Conference on Signals, Systems and Computers, 2013, 2013
692013
Robust learning of low dimensional dynamics from large neural ensembles
D Pfau, EA Pnevmatikakis, L Paninski
Advances in Neural Information Processing Systems, 2391-2399, 2013
652013
Excitatory and inhibitory subnetworks are equally selective during decision-making and emerge simultaneously during learning
F Najafi, GF Elsayed, R Cao, E Pnevmatikakis, PE Latham, ...
Neuron 105 (1), 165-179. e8, 2020
632020
Faithful representation of stimuli with a population of integrate-and-fire neurons
AA Lazar, EA Pnevmatikakis
Neural computation 20 (11), 2715-2744, 2008
582008
OnACID: Online analysis of calcium imaging data in real time
A Giovannucci, J Friedrich, M Kaufman, A Churchland, D Chklovskii, ...
Advances in neural information processing systems 30, 2017
562017
Primacy of flexor locomotor pattern revealed by ancestral reversion of motor neuron identity
TA Machado, E Pnevmatikakis, L Paninski, TM Jessell, A Miri
Cell 162 (2), 338-350, 2015
552015
Differential emergence and stability of sensory and temporal representations in context-specific hippocampal sequences
J Taxidis, EA Pnevmatikakis, CC Dorian, AL Mylavarapu, JS Arora, ...
Neuron 108 (5), 984-998. e9, 2020
51*2020
Sparse nonnegative deconvolution for compressive calcium imaging: algorithms and phase transitions
EA Pnevmatikakis, L Paninski
Advances in Neural Information Processing Systems, 2013, 2013
512013
Analysis pipelines for calcium imaging data
EA Pnevmatikakis
Current opinion in neurobiology 55, 15-21, 2019
502019
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Articles 1–20