| Simultaneous denoising, deconvolution, and demixing of calcium imaging data EA Pnevmatikakis, D Soudry, Y Gao, TA Machado, J Merel, D Pfau, ... Neuron 89 (2), 285-299, 2016 | 804 | 2016 |
| NoRMCorre: An online algorithm for piecewise rigid motion correction of calcium imaging data EA Pnevmatikakis, A Giovannucci Journal of Neuroscience Methods 291, 83-94, 2017 | 432 | 2017 |
| CaImAn an open source tool for scalable calcium imaging data analysis A Giovannucci, J Friedrich, P Gunn, J Kalfon, BL Brown, SA Koay, ... Elife 8, e38173, 2019 | 378 | 2019 |
| Efficient and accurate extraction of in vivo calcium signals from microendoscopic video data P Zhou, SL Resendez, J Rodriguez-Romaguera, JC Jimenez, SQ Neufeld, ... elife 7, e28728, 2018 | 371 | 2018 |
| A robotic multidimensional directed evolution approach applied to fluorescent voltage reporters KD Piatkevich, EE Jung, C Straub, C Linghu, D Park, HJ Suk, ... Nature chemical biology 14 (4), 352-360, 2018 | 253 | 2018 |
| Simultaneous multi-plane imaging of neural circuits W Yang, JK Miller, L Carrillo-Reid, E Pnevmatikakis, L Paninski, R Yuste, ... Neuron 89 (2), 269-284, 2016 | 212 | 2016 |
| Cerebellar granule cells acquire a widespread predictive feedback signal during motor learning A Giovannucci, A Badura, B Deverett, F Najafi, TD Pereira, Z Gao, I Ozden, ... Nature neuroscience 20 (5), 727-734, 2017 | 148 | 2017 |
| Population-level representation of a temporal sequence underlying song production in the zebra finch MA Picardo, J Merel, KA Katlowitz, D Vallentin, DE Okobi, SE Benezra, ... Neuron 90 (4), 866-876, 2016 | 118 | 2016 |
| MULTI-INPUT MULTI-OUTPUT TIME ENCODING AND DECODING MACHINES AA Lazar, EA Pnevmatikakis US Patent 20,120,039,399, 2012 | 85 | 2012 |
| Spatiotemporal receptive fields of barrel cortex revealed by reverse correlation of synaptic input A Ramirez, EA Pnevmatikakis, J Merel, L Paninski, KD Miller, RM Bruno Nature neuroscience 17 (6), 866-875, 2014 | 79 | 2014 |
| Video time encoding machines AA Lazar, EA Pnevmatikakis IEEE Transactions on Neural Networks 22 (3), 461-473, 2011 | 79 | 2011 |
| Bayesian spike inference from calcium imaging data EA Pnevmatikakis, J Merel, A Pakman, L Paninski Asilomar Conference on Signals, Systems and Computers, 2013, 2013 | 69 | 2013 |
| Robust learning of low dimensional dynamics from large neural ensembles D Pfau, EA Pnevmatikakis, L Paninski Advances in Neural Information Processing Systems, 2391-2399, 2013 | 65 | 2013 |
| Excitatory and inhibitory subnetworks are equally selective during decision-making and emerge simultaneously during learning F Najafi, GF Elsayed, R Cao, E Pnevmatikakis, PE Latham, ... Neuron 105 (1), 165-179. e8, 2020 | 63 | 2020 |
| Faithful representation of stimuli with a population of integrate-and-fire neurons AA Lazar, EA Pnevmatikakis Neural computation 20 (11), 2715-2744, 2008 | 58 | 2008 |
| OnACID: Online analysis of calcium imaging data in real time A Giovannucci, J Friedrich, M Kaufman, A Churchland, D Chklovskii, ... Advances in neural information processing systems 30, 2017 | 56 | 2017 |
| Primacy of flexor locomotor pattern revealed by ancestral reversion of motor neuron identity TA Machado, E Pnevmatikakis, L Paninski, TM Jessell, A Miri Cell 162 (2), 338-350, 2015 | 55 | 2015 |
| Differential emergence and stability of sensory and temporal representations in context-specific hippocampal sequences J Taxidis, EA Pnevmatikakis, CC Dorian, AL Mylavarapu, JS Arora, ... Neuron 108 (5), 984-998. e9, 2020 | 51* | 2020 |
| Sparse nonnegative deconvolution for compressive calcium imaging: algorithms and phase transitions EA Pnevmatikakis, L Paninski Advances in Neural Information Processing Systems, 2013, 2013 | 51 | 2013 |
| Analysis pipelines for calcium imaging data EA Pnevmatikakis Current opinion in neurobiology 55, 15-21, 2019 | 50 | 2019 |
Liam PaninskiColumbia UniversityVerified email at stat.columbia.edu
