Dr. Fabian Schreiber
Dr. Fabian Schreiber
Data Scientist, Boehringer Ingelheim
Verified email at boehringer-ingelheim.com
Title
Cited by
Cited by
Year
Phylogenomics revives traditional views on deep animal relationships
H Philippe, R Derelle, P Lopez, K Pick, C Borchiellini, N Boury-Esnault, ...
Current Biology 19 (8), 706-712, 2009
6502009
HMMER web server: 2015 update
RD Finn, J Clements, W Arndt, BL Miller, TJ Wheeler, F Schreiber, ...
Nucleic acids research 43 (W1), W30-W38, 2015
5662015
Improved phylogenomic taxon sampling noticeably affects nonbilaterian relationships
KS Pick, H Philippe, F Schreiber, D Erpenbeck, DJ Jackson, P Wrede, ...
Molecular biology and evolution 27 (9), 1983-1987, 2010
3222010
Deep metazoan phylogeny: when different genes tell different stories
T Nosenko, F Schreiber, M Adamska, M Adamski, M Eitel, J Hammel, ...
Molecular phylogenetics and evolution 67 (1), 223-233, 2013
2242013
Standardized benchmarking in the quest for orthologs
AM Altenhoff, B Boeckmann, S Capella-Gutierrez, DA Dalquen, T DeLuca, ...
Nature methods 13 (5), 425-430, 2016
1192016
TreeFam v9: a new website, more species and orthology-on-the-fly
F Schreiber, M Patricio, M Muffato, M Pignatelli, A Bateman
Nucleic acids research 42 (D1), D922-D925, 2014
1022014
Toward community standards in the quest for orthologs
C Dessimoz, T Gabaldón, DS Roos, ELL Sonnhammer, J Herrero, ...
Bioinformatics 28 (6), 900-904, 2012
852012
Letter to the editor: SeqXML and OrthoXML: standards for sequence and orthology information
T Schmitt, DN Messina, F Schreiber, ELL Sonnhammer
Briefings in bioinformatics 12 (5), 485-488, 2011
612011
Treephyler: fast taxonomic profiling of metagenomes
F Schreiber, P Gumrich, R Daniel, P Meinicke
Bioinformatics 26 (7), 960-961, 2010
612010
CoMet—a web server for comparative functional profiling of metagenomes
T Lingner, KP Aßhauer, F Schreiber, P Meinicke
Nucleic acids research 39 (suppl_2), W518-W523, 2011
582011
Hieranoid: hierarchical orthology inference
F Schreiber, ELL Sonnhammer
Journal of molecular biology 425 (11), 2072-2081, 2013
292013
OrthoSelect: a protocol for selecting orthologous groups in phylogenomics
F Schreiber, K Pick, D Erpenbeck, G Wörheide, B Morgenstern
BMC bioinformatics 10 (1), 219, 2009
252009
BioJS: an open source standard for biological visualisation–its status in 2014
M Corpas, R Jimenez, SJ Carbon, A García, L Garcia, T Goldberg, ...
F1000Research 3, 2014
212014
OrthoDisease: tracking disease gene orthologs across 100 species
K Forslund, F Schreiber, N Thanintorn, ELL Sonnhammer
Briefings in bioinformatics 12 (5), 463-473, 2011
182011
HIV classification using the coalescent theory
I Bulla, AK Schultz, F Schreiber, M Zhang, T Leitner, B Korber, ...
Bioinformatics 26 (11), 1409-1415, 2010
112010
Deep metazoan phylogeny: the backbone of the tree of life
JW Wagele, T Bartholomaeus
Walter De Gruyter, 2014
82014
OrthoSelect: a web server for selecting orthologous gene alignments from EST sequences
F Schreiber, G Wörheide, B Morgenstern
Nucleic acids research 37 (suppl_2), W185-W188, 2009
32009
A phylogeny pipeline and its application to contribute to resolving the phylogeny of sponges (Phylum Porifera)
F Schreiber
Master’s thesis, Universität Göttingen, Biologische Fakultät, Abteilung …, 2007
22007
Florence Servant, Christian JA Sigrist, and InterPro Consortium. Interpro: an integrated documentation resource for protein families, domains and functional sites
NJ Mulder, R Apweiler, TK Attwood, A Bairoch, A Bateman, D Binns, ...
Brief Bioinform 3 (3), 225-235, 2002
22002
treeWidget: a BioJS component to visualise phylogenetic trees
F Schreiber
F1000Research 3 (49), 49, 2014
12014
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Articles 1–20