| Manipulation of magnetic microbeads in suspension using micromagnetic systems fabricated with soft lithography T Deng, GM Whitesides, M Radhakrishnan, G Zabow, M Prentiss Applied physics letters 78 (12), 1775-1777, 2001 | 232 | 2001 |
| Direct dynamics for free radical kinetics in solution: Solvent effect on the rate constant for the reaction of methanol with atomic hydrogen YY Chuang, ML Radhakrishnan, PL Fast, CJ Cramer, DG Truhlar The Journal of Physical Chemistry A 103 (25), 4893-4909, 1999 | 141 | 1999 |
| Defining Cdk5 ligand chemical space with small molecule inhibitors of tau phosphorylation JS Ahn, ML Radhakrishnan, M Mapelli, S Choi, B Tidor, GD Cuny, ... Chemistry & biology 12 (7), 811-823, 2005 | 93 | 2005 |
| A dual receptor crosstalk model of G-protein-coupled signal transduction P Flaherty, ML Radhakrishnan, T Dinh, RA Rebres, TI Roach, MI Jordan, ... PLoS computational biology 4 (9), e1000185, 2008 | 47 | 2008 |
| Specificity in molecular design: a physical framework for probing the determinants of binding specificity and promiscuity in a biological environment ML Radhakrishnan, B Tidor The Journal of Physical Chemistry B 111 (47), 13419-13435, 2007 | 42 | 2007 |
| Investigating the nucleic acid interactions of histone‐derived antimicrobial peptides S Sim, P Wang, BN Beyer, KJ Cutrona, ML Radhakrishnan, DE Elmore FEBS letters 591 (5), 706-717, 2017 | 39 | 2017 |
| Optimal drug cocktail design: methods for targeting molecular ensembles and insights from theoretical model systems ML Radhakrishnan, B Tidor Journal of chemical information and modeling 48 (5), 1055-1073, 2008 | 39 | 2008 |
| Symmetric signaling by an asymmetric 1 erythropoietin: 2 erythropoietin receptor complex YL Zhang, ML Radhakrishnan, X Lu, AW Gross, B Tidor, HF Lodish Molecular cell 33 (2), 266-274, 2009 | 33 | 2009 |
| A multifaceted analysis of HIV-1 protease multidrug resistance phenotypes KM Doherty, P Nakka, BM King, SY Rhee, SP Holmes, RW Shafer, ... BMC bioinformatics 12, 1-19, 2011 | 27 | 2011 |
| Designing electrostatic interactions in biological systems via charge optimization or combinatorial approaches: insights and challenges with a continuum electrostatic framework ML Radhakrishnan Theoretical Chemistry Accounts 131, 1-24, 2012 | 22 | 2012 |
| The effect of macromolecular crowding on the electrostatic component of Barnase–Barstar binding: a computational, implicit solvent-based study HW Qi, P Nakka, C Chen, ML Radhakrishnan PLoS One 9 (6), e98618, 2014 | 21 | 2014 |
| Multiple drugs and multiple targets: An analysis of the electrostatic determinants of binding between non‐nucleoside HIV‐1 reverse transcriptase inhibitors and variants of HIV‐1 RT MS Minkara, PH Davis, ML Radhakrishnan Proteins: Structure, Function, and Bioinformatics 80 (2), 573-590, 2012 | 13 | 2012 |
| Molecular mechanisms and design principles for promiscuous inhibitors to avoid drug resistance: Lessons learned from HIV‐1 protease inhibition Y Shen, ML Radhakrishnan, B Tidor Proteins: Structure, Function, and Bioinformatics 83 (2), 351-372, 2015 | 11 | 2015 |
| Computationally Modeling Electrostatic Binding Energetics in a Crowded, Dynamic Environment: Physical Insights from a Peptide–DNA System CP Perez, DE Elmore, ML Radhakrishnan The Journal of Physical Chemistry B 123 (50), 10718-10734, 2019 | 10 | 2019 |
| Dead-end elimination as a heuristic for min-cut image segmentation ML Radhakrishnan, SL Su 2006 International Conference on Image Processing, 2429-2432, 2006 | 8 | 2006 |
| Effect of the spiroiminodihydantoin lesion on nucleosome stability and positioning EM Norabuena, S Barnes Williams, MA Klureza, LJ Goehring, ... Biochemistry 55 (16), 2411-2421, 2016 | 6 | 2016 |
| Macromolecular crowding effects on electrostatic binding affinity: Fundamental insights from theoretical, idealized models R Kim, ML Radhakrishnan The Journal of Chemical Physics 154 (22), 2021 | 4 | 2021 |
| The quantum mechanics of a rolling molecular “Nanocar” OE Fernandez, ML Radhakrishnan Scientific Reports 8 (1), 14878, 2018 | 4 | 2018 |
| Analysis of fast boundary-integral approximations for modeling electrostatic contributions of molecular binding AB Kreienkamp, LY Liu, MS Minkara, MG Knepley, JP Bardhan, ... Computational and Mathematical Biophysics 1 (2013), 124-150, 2013 | 3 | 2013 |
| A fully integrated undergraduate introductory biology and chemistry course with a community‐based focus II: Assessment of course effectiveness S Pociask, A Weerapana, P Taylor, ML Radhakrishnan, ESC Oakes, ... Biochemistry and Molecular Biology Education 49 (5), 737-747, 2021 | 2 | 2021 |
