Ramy Farid
Ramy Farid
Verified email at schrodinger.com
Cited by
Cited by
Nature of biological electron transfer
CC Moser, JM Keske, K Warncke, RS Farid, PL Dutton
Nature 355 (6363), 796-802, 1992
Novel procedure for modeling ligand/receptor induced fit effects
W Sherman, T Day, MP Jacobson, RA Friesner, R Farid
Journal of medicinal chemistry 49 (2), 534-553, 2006
Integrated modeling program, applied chemical theory (IMPACT)
JL Banks, HS Beard, Y Cao, AE Cho, W Damm, R Farid, AK Felts, ...
Journal of computational chemistry 26 (16), 1752-1780, 2005
Accurate and reliable prediction of relative ligand binding potency in prospective drug discovery by way of a modern free-energy calculation protocol and force field
L Wang, Y Wu, Y Deng, B Kim, L Pierce, G Krilov, D Lupyan, S Robinson, ...
Journal of the American Chemical Society 137 (7), 2695-2703, 2015
Role of the active-site solvent in the thermodynamics of factor Xa ligand binding
R Abel, T Young, R Farid, BJ Berne, RA Friesner
Journal of the American Chemical Society 130 (9), 2817-2831, 2008
Design and synthesis of multi-haem proteins
DE Robertson, RS Farid, CC Moser, JL Urbauer, SE Mulholland, R Pidikiti, ...
Nature 368 (6470), 425-432, 1994
Use of an induced fit receptor structure in virtual screening
W Sherman, HS Beard, R Farid
Chemical biology & drug design 67 (1), 83-84, 2006
New insights about HERG blockade obtained from protein modeling, potential energy mapping, and docking studies
R Farid, T Day, RA Friesner, RA Pearlstein
Bioorganic & medicinal chemistry 14 (9), 3160-3173, 2006
Biological electron transfer
CC Moser, CC Page, R Farid, PL Dutton
Journal of bioenergetics and biomembranes 27 (3), 263-274, 1995
Docking covalent inhibitors: a parameter free approach to pose prediction and scoring
K Zhu, KW Borrelli, JR Greenwood, T Day, R Abel, RS Farid, E Harder
Journal of chemical information and modeling 54 (7), 1932-1940, 2014
De novo heme proteins from designed combinatorial libraries
MH Hecht, KM Vogel, TG Spiro, NRL Rojas, S Kamtekar, CT Simons, ...
Protein Science 6 (12), 2512-2524, 1997
Understanding kinase selectivity through energetic analysis of binding site waters
DD Robinson, W Sherman, R Farid
ChemMedChem: Chemistry Enabling Drug Discovery 5 (4), 618-627, 2010
High‐energy water sites determine peptide binding affinity and specificity of PDZ domains
T Beuming, R Farid, W Sherman
Protein science 18 (8), 1609-1619, 2009
Contribution of explicit solvent effects to the binding affinity of small‐molecule inhibitors in blood coagulation factor serine proteases
R Abel, NK Salam, J Shelley, R Farid, RA Friesner, W Sherman
ChemMedChem 6 (6), 1049-1066, 2011
The Structure of the N-Terminus of Striated Muscle α-Tropomyosin in a Chimeric Peptide:  Nuclear Magnetic Resonance Structure and Circular Dichroism Studies,
NJ Greenfield, GT Montelione, RS Farid, SE Hitchcock-DeGregori
Biochemistry 37 (21), 7834-7843, 1998
Electron transfer in proteins
RS Farid, CC Moser, PL Dutton
Current Opinion in Structural Biology 3 (2), 225-233, 1993
A role for a specific cholesterol interaction in stabilizing the Apo configuration of the human A2A adenosine receptor
E Lyman, C Higgs, B Kim, D Lupyan, JC Shelley, R Farid, GA Voth
Structure 17 (12), 1660-1668, 2009
Thermal equilibrium of high-and low-spin forms of cytochrome P450 BM-3: repositioning of the substrate?
T Jovanovic, R Farid, RA Friesner, AE McDermott
Journal of the American Chemical Society 127 (39), 13548-13552, 2005
Improving database enrichment through ensemble docking
S Rao, PC Sanschagrin, JR Greenwood, MP Repasky, W Sherman, ...
Journal of computer-aided molecular design 22 (9), 621-627, 2008
Bonded exciplexes. A new concept in photochemical reactions
Y Wang, O Haze, JP Dinnocenzo, S Farid, RS Farid, IR Gould
The Journal of Organic Chemistry 72 (18), 6970-6981, 2007
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