| Speeding molecular recognition by using the folding funnel: the fly-casting mechanism BA Shoemaker, JJ Portman, PG Wolynes Proceedings of the National Academy of Sciences 97 (16), 8868-8873, 2000 | 1148 | 2000 |
| Peptide folding simulations S Gnanakaran, H Nymeyer, J Portman, KY Sanbonmatsu, AE Garcıa Current opinion in structural biology 13 (2), 168-174, 2003 | 257 | 2003 |
| Microscopic theory of protein folding rates. II. Local reaction coordinates and chain dynamics JJ Portman, S Takada, PG Wolynes The Journal of Chemical Physics 114 (11), 5082-5096, 2001 | 194 | 2001 |
| Variational theory for site resolved protein folding free energy surfaces JJ Portman, S Takada, PG Wolynes Physical review letters 81 (23), 5237, 1998 | 137 | 1998 |
| Microscopic theory of protein folding rates. I. Fine structure of the free energy profile and folding routes from a variational approach JJ Portman, S Takada, PG Wolynes The Journal of Chemical Physics 114 (11), 5069-5081, 2001 | 120 | 2001 |
| Non-Gaussian dynamics from a simulation of a short peptide: loop closure rates and effective diffusion coefficients JJ Portman The Journal of chemical physics 118 (5), 2381-2391, 2003 | 74 | 2003 |
| Inherent flexibility determines the transition mechanisms of the EF-hands of calmodulin S Tripathi, JJ Portman Proceedings of the National Academy of Sciences 106 (7), 2104-2109, 2009 | 73 | 2009 |
| Complementary variational approximations for intermittency and reaction dynamics in fluctuating environments JJ Portman, PG Wolynes The Journal of Physical Chemistry A 103 (49), 10602-10610, 1999 | 37 | 1999 |
| Cooperativity and protein folding rates JJ Portman Current opinion in structural biology 20 (1), 11-15, 2010 | 32 | 2010 |
| An elementary mode coupling theory of random heteropolymer dynamics S Takada, JJ Portman, PG Wolynes Proceedings of the National Academy of Sciences 94 (6), 2318-2321, 1997 | 32 | 1997 |
| Excluded volume, local structural cooperativity, and the polymer physics of protein folding rates X Qi, JJ Portman Proceedings of the National Academy of Sciences 104 (26), 10841-10846, 2007 | 26 | 2007 |
| Inherent flexibility and protein function: The open/closed conformational transition in the N-terminal domain of calmodulin S Tripathi, JJ Portman The Journal of Chemical Physics 128 (20), 2008 | 25 | 2008 |
| Capillarity-like growth of protein folding nuclei X Qi, JJ Portman Proceedings of the National Academy of Sciences 105 (32), 11164-11169, 2008 | 13 | 2008 |
| Conformational flexibility and the mechanisms of allosteric transitions in topologically similar proteins S Tripathi, JJ Portman The Journal of chemical physics 135 (7), 2011 | 12 | 2011 |
| Coarse-grained molecular simulations of allosteric cooperativity P Nandigrami, JJ Portman The Journal of chemical physics 144 (10), 2016 | 11 | 2016 |
| Variationally determined free energy profiles for structural models of proteins: characteristic temperatures for folding and trapping T Shen, C Zong, JJ Portman, PG Wolynes The Journal of Physical Chemistry B 112 (19), 6074-6082, 2008 | 11 | 2008 |
| Theoretical investigation of collisions of aligned atoms: Ca (4s4f 1 F)+ He AP Hickman, JJ Portman, S Krebs, W Meyer Physical review letters 72 (12), 1814, 1994 | 11 | 1994 |
| Emerging accessibility patterns in long telomeric overhangs SA Shiekh, G Mustafa, ME Hoque, E Yokie, JJ Portman, H Balci Biophysical Journal 121 (3), 67a, 2022 | 9 | 2022 |
| Allostery and folding of the N-terminal receiver domain of protein ntrc S Tripathi, JJ Portman The Journal of Physical Chemistry B 117 (42), 13182-13193, 2013 | 7 | 2013 |
| Comparing allosteric transitions in the domains of calmodulin through coarse-grained simulations P Nandigrami, JJ Portman The Journal of chemical physics 144 (10), 2016 | 6 | 2016 |
