Giovanna Rosone
Giovanna Rosone
University of Pisa
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Large-scale compression of genomic sequence databases with the Burrows–Wheeler transform
AJ Cox, MJ Bauer, T Jakobi, G Rosone
Bioinformatics 28 (11), 1415-1419, 2012
1432012
An extension of the Burrows–Wheeler transform
S Mantaci, A Restivo, G Rosone, M Sciortino
Theoretical Computer Science 387 (3), 298-312, 2007
982007
Lightweight algorithms for constructing and inverting the BWT of string collections
MJ Bauer, AJ Cox, G Rosone
Theoretical Computer Science 483, 134-148, 2013
852013
Lightweight BWT construction for very large string collections
MJ Bauer, AJ Cox, G Rosone
Annual Symposium on Combinatorial Pattern Matching, 219-231, 2011
562011
An extension of the Burrows Wheeler transform and applications to sequence comparison and data compression
S Mantaci, A Restivo, G Rosone, M Sciortino
Annual Symposium on Combinatorial Pattern Matching, 178-189, 2005
502005
Adaptive reference-free compression of sequence quality scores
L Janin, G Rosone, AJ Cox
Bioinformatics 30 (1), 24-30, 2014
392014
A new combinatorial approach to sequence comparison
S Mantaci, A Restivo, G Rosone, M Sciortino
Theory of Computing Systems 42 (3), 411-429, 2008
352008
Lightweight LCP construction for next-generation sequencing datasets
MJ Bauer, AJ Cox, G Rosone, M Sciortino
International Workshop on Algorithms in Bioinformatics, 326-337, 2012
312012
Burrows–Wheeler transform and palindromic richness
A Restivo, G Rosone
Theoretical Computer Science 410 (30-32), 3018-3026, 2009
302009
Lightweight LCP construction for very large collections of strings
AJ Cox, F Garofalo, G Rosone, M Sciortino
Journal of Discrete Algorithms 37, 17-33, 2016
262016
Comparing DNA sequence collections by direct comparison of compressed text indexes
AJ Cox, T Jakobi, G Rosone, OB Schulz-Trieglaff
International Workshop on Algorithms in Bioinformatics, 214-224, 2012
262012
Balancing and clustering of words in the Burrows–Wheeler transform
A Restivo, G Rosone
Theoretical computer science 412 (27), 3019-3032, 2011
262011
On-line pattern matching on similar texts
R Grossi, CS Iliopoulos, L Chang, N Pisanti, SP Pissis, R Ahmad, ...
28th Annual Symposium on Combinatorial Pattern Matching (CPM) 78, 1, 2017
242017
Suffix array and Lyndon factorization of a text
S Mantaci, A Restivo, G Rosone, M Sciortino
Journal of Discrete Algorithms 28, 2-8, 2014
202014
Methods and systems for data analysis using the Burrows Wheeler transform
MJ Bauer, AJ Cox, G Rosone, D Evers
US Patent 8,798,936, 2014
202014
Cystic dysplasia of rete testis associated with ipsilateral renal agenesis. Case report
M Cimador, G Rosone, M Castagnetti, M Libri, M Bertozzi, M Lima, ...
Minerva pediatrica 55 (2), 175-179, 2003
192003
SNPs detection by eBWT positional clustering
N Prezza, N Pisanti, M Sciortino, G Rosone
Algorithms for Molecular Biology 14 (1), 1-13, 2019
182019
Pattern matching on elastic-degenerate text with errors
G Bernardini, N Pisanti, SP Pissis, G Rosone
International Symposium on String Processing and Information Retrieval, 74-90, 2017
162017
The Burrows-Wheeler transform between data compression and combinatorics on words
G Rosone, M Sciortino
Conference on Computability in Europe, 353-364, 2013
162013
Measuring the clustering effect of BWT via RLE
S Mantaci, A Restivo, G Rosone, M Sciortino, L Versari
Theoretical Computer Science 698, 79-87, 2017
152017
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Artículos 1–20