Juan Manuel Vanegas
Juan Manuel Vanegas
Assistant Professor of Physics, University of Vermont
Verified email at uvm.edu - Homepage
TitleCited byYear
AFM for structure and dynamics of biomembranes
EI Goksu, JM Vanegas, CD Blanchette, WC Lin, ML Longo
Biochimica et Biophysica Acta (BBA)-Biomembranes 1788 (1), 254-266, 2009
1722009
Role of unsaturated lipid and ergosterol in ethanol tolerance of model yeast biomembranes
JM Vanegas, MF Contreras, R Faller, ML Longo
Biophysical journal 102 (3), 507-516, 2012
692012
Importance of force decomposition for local stress calculations in biomembrane molecular simulations
JM Vanegas, A Torres-Sánchez, M Arroyo
Journal of chemical theory and computation 10 (2), 691-702, 2014
682014
Examining the mechanical equilibrium of microscopic stresses in molecular simulations
A Torres-Sánchez, JM Vanegas, M Arroyo
Physical Review Letters 114, 258102, 2015
362015
Influence of ethanol on lipid/sterol membranes: phase diagram construction from AFM imaging
JM Vanegas, R Faller, ML Longo
Langmuir 26 (13), 10415-10418, 2010
282010
Force Transduction and Lipid Binding in MscL: A Continuum-Molecular Approach
JM Vanegas, M Arroyo
PLoS One 9 (12), e113947, 2014
242014
Crystalline, ordered and disordered lipid membranes: convergence of stress profiles due to ergosterol
JM Vanegas, ML Longo, R Faller
Journal of the American Chemical Society 133 (11), 3720-3723, 2011
162011
Catalytic role of the substrate defines specificity of therapeutic L-asparaginase
A Anishkin, JM Vanegas, DM Rogers, PL Lorenzi, WK Chan, P Purwaha, ...
Journal of molecular biology 427 (17), 2867-2885, 2015
112015
Ultra-thin enzymatic liquid membrane for CO 2 separation and capture
Y Fu, YB Jiang, D Dunphy, H Xiong, E Coker, S Chou, H Zhang, ...
Nature communications 9 (1), 990, 2018
92018
Geometric derivation of the microscopic stress: A covariant central force decomposition
A Torres-Sánchez, JM Vanegas, M Arroyo
Journal of the Mechanics and Physics of Solids 93, 224-239, 2016
62016
Computing the Local Stress Tensor in MD Simulations
JM Vanegas, A Torres-Sánchez, M Arroyo
5
Probing key elements of teixobactin–lipid II interactions in membranes
PC Wen, JM Vanegas, SB Rempe, E Tajkhorshid
Chemical science 9 (34), 6997-7008, 2018
32018
Insertion of dengue E into lipid bilayers studied by neutron reflectivity and molecular dynamics simulations
JM Vanegas, F Heinrich, DM Rogers, BD Carson, S La Bauve, BC Vernon, ...
Biochimica et Biophysica Acta (BBA)-Biomembranes 1860, 1216-1230, 2018
22018
Spinodal Dewetting Instabilities on Graphene and two-dimensional atomic crystals
V Kotov, D Peterson, J Vanegas
Bulletin of the American Physical Society, 2019
2019
A Comparison of Atomistic and Coarse-Grain MD Simulations Through Local Stress Analysis of Lipid Bilayers
C Winkeljohn, J Vanegas
Bulletin of the American Physical Society, 2019
2019
Exploring the Hydrophobic Barrier of Human K2P Channel TWIK1 with Steered MD Simulations
B Poudel, RR Tatikonda, JM Vanegas
Biophysical Journal 116 (3), 208a, 2019
2019
Mechanics, Structure, and Energetics of MscL through Local Stress Calculations and Steered MD Simulations
JM Vanegas, RR Tatikonda
Biophysical Journal 116 (3), 378a, 2019
2019
Dynamics and Energetics of Gating Mechanism in Mechanosensitive Channel of Large Conductance (MscL)
RR Tatikonda, JM Vanegas
Biophysical Journal 116 (3), 207a, 2019
2019
Force transduction and anchoring of the mechanosensitive channel MscL to lipid membrane through charged interactions
J Vanegas, R Rajeshwar, M Arroyo
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 256, 2018
2018
Bacterial L-asparaginases: old friend and persistent foe
J Lubkowski, A Anishkin, WK Chan, D Fushman, PL Lorenzi, SB Rempe, ...
FEBS OPEN BIO 8, 282-283, 2018
2018
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Articles 1–20