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Thomas Dannenhoffer-Lafage
Thomas Dannenhoffer-Lafage
Dirección de correo verificada de nih.gov
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Extending the range and physical accuracy of coarse-grained models: Order parameter dependent interactions
JW Wagner, T Dannenhoffer-Lafage, J Jin, GA Voth
The Journal of chemical physics 147 (4), 2017
682017
A data-driven hydrophobicity scale for predicting liquid–liquid phase separation of proteins
T Dannenhoffer-Lafage, RB Best
The Journal of Physical Chemistry B 125 (16), 4046-4056, 2021
632021
A direct method for incorporating experimental data into multiscale coarse-grained models
T Dannenhoffer-Lafage, AD White, GA Voth
Journal of chemical theory and computation 12 (5), 2144-2153, 2016
372016
Systematic coarse-grained lipid force fields with semiexplicit solvation via virtual sites
AJ Pak, T Dannenhoffer-Lafage, JJ Madsen, GA Voth
Journal of Chemical Theory and Computation 15 (3), 2087-2100, 2019
342019
Compatible observable decompositions for coarse-grained representations of real molecular systems
T Dannenhoffer-Lafage, JW Wagner, AEP Durumeric, GA Voth
The Journal of chemical physics 151 (13), 2019
222019
Multiconfigurational coarse-grained molecular dynamics
ME Sharp, FX Vázquez, JW Wagner, T Dannenhoffer-Lafage, GA Voth
Journal of chemical theory and computation 15 (5), 3306-3315, 2019
222019
Reactive coarse-grained molecular dynamics
T Dannenhoffer-Lafage, GA Voth
Journal of Chemical Theory and Computation 16 (4), 2541-2549, 2020
132020
Coarse-grained directed simulation
GM Hocky, T Dannenhoffer-Lafage, GA Voth
Journal of chemical theory and computation 13 (9), 4593-4603, 2017
132017
Coarse-grained intrinsically disordered protein simulations with explicit ions parameterized by salting-out constants
TP Dannenhoffer-Lafage, RB Best
Biophysical Journal 122 (3), 59a, 2023
2023
Coarse-grained molecular dynamics study of fibril formation occurring in the low complexity domain of Fused in Sarcoma within a liquid droplet environment
TP Dannenhoffer-Lafage, RB Best
Biophysical Journal 121 (3), 444a, 2022
2022
Bottom-Up Coarse-Grained Models for Intrinsically Disordered Proteins
TP Dannenhoffer-Lafage, RB Best
Biophysical Journal 120 (3), 29a, 2021
2021
Explicit Ions for Coarse-Grained Simulations of Intrinsically Disordered Proteins via Hydrophobicity/Hydrophilicity Scales
TP Dannenhoffer-Lafage, RB Best
Biophysical Journal 118 (3), 142a, 2020
2020
Simulation of Hofmeister effects in intrinsically disordered proteins via explicit ion coarse-grained simulations utilizing hydrophobicity scale interactions
T Dannenhoffer-Lafage, R Best
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 258, 2019
2019
A Hybrid Approach Toward Systematically-Derived Implicit-Solvent Coarse-Grained Lipid Models
AJ Pak, T Dannenhoffer-Lafage, JJ Madsen, GA Voth
2018 AIChE Annual Meeting, 2018
2018
Basis Sets and Optimization for Coarse-grained Models
T Dannenhoffer-Lafage
The University of Chicago, 2018
2018
Coarse-grained directed simulations via adaptive linear biases
G Hocky, T Dannenhoffer-Lafage, G Voth
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 254, 2017
2017
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