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Sammed Mandape
Sammed Mandape
Othram
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Identification of specific oral and gut pathogens in full thickness colon of colitis patients: implications for colon motility
V Dinakaran, SN Mandape, K Shuba, S Pratap, SS Sakhare, ...
Frontiers in Microbiology 9, 3220, 2019
632019
Early Regulation of Profibrotic Genes in Primary Human Cardiac Myocytes by Trypanosoma cruzi
AN Udoko, CA Johnson, A Dykan, G Rachakonda, F Villalta, SN Mandape, ...
PLoS neglected tropical diseases 10 (1), e0003747, 2016
452016
PAGED: a pathway and gene-set enrichment database to enable molecular phenotype discoveries
H Huang, X Wu, M Sonachalam, SN Mandape, R Pandey, ...
BMC bioinformatics 13, 1-12, 2012
272012
Proteomics profiling of autologous blood and semen exosomes from HIV-infected and uninfected individuals reveals compositional and functional variabilities
H Kaddour, Y Lyu, JL Welch, V Paromov, SN Mandape, SS Sakhare, ...
Molecular & cellular proteomics 19 (1), 78-100, 2020
262020
STRait Razor Online: An enhanced user interface to facilitate interpretation of MPS data
JL King, AE Woerner, SN Mandape, KB Kapema, RS Moura-Neto, R Silva, ...
Forensic Science International: Genetics 52, 102463, 2021
222021
Phospho-proteomic analysis of primary human colon epithelial cells during the early Trypanosoma cruzi infection phase
S Suman, G Rachakonda, SN Mandape, SS Sakhare, F Villalta, S Pratap, ...
PLoS Neglected Tropical Diseases 12 (9), e0006792, 2018
172018
Reducing noise and stutter in short tandem repeat loci with unique molecular identifiers
AE Woerner, S Mandape, JL King, M Muenzler, B Crysup, B Budowle
Forensic Science International: Genetics 51, 102459, 2021
142021
Transcriptome profile of OVCAR3 cisplatin-resistant ovarian cancer cell line
SS Sakhare, GG Rao, SN Mandape, S Pratap
BMC Bioinformatics 15, 1-3, 2014
132014
A continuous statistical phasing framework for the analysis of forensic mitochondrial DNA mixtures
U Smart, JC Cihlar, SN Mandape, M Muenzler, JL King, B Budowle, ...
Genes 12 (2), 128, 2021
112021
Enhanced mixture interpretation with macrohaplotypes based on long-read DNA sequencing
J Ge, J King, S Mandape, B Budowle
International Journal of Legal Medicine 135, 2189-2198, 2021
62021
Using unique molecular identifiers to improve allele calling in low-template mixtures
B Crysup, S Mandape, JL King, M Muenzler, KB Kapema, AE Woerner
Forensic Science International: Genetics 63, 102807, 2023
52023
Metformin regulates multiple signaling pathways within castration-resistant human prostate cancer cells
E Olokpa, SN Mandape, S Pratap, LMV Stewart
BMC cancer 22 (1), 1025, 2022
52022
MMDIT: A tool for the deconvolution and interpretation of mitochondrial DNA mixtures
SN Mandape, U Smart, JL King, M Muenzler, KB Kapema, B Budowle, ...
Forensic Science International: Genetics 55, 102568, 2021
52021
Optimized variant calling for estimating kinship
AE Woerner, S Mandape, KB Kapema, TM Duque, A Smuts, JL King, ...
Forensic Science International: Genetics 61, 102785, 2022
32022
Iron Superoxide Dismutase is Upregulated in Response to Antibiotic Challenge in Multi‐Drug Resistant Acinetobacter baumannii
S Damo, R Pattanayek, K Amoah, RN Boone, A Mittal, A Teran, ...
The FASEB Journal 33 (S1), 483.3-483.3, 2019
32019
Evaluating probabilistic genotyping for low-pass DNA sequencing
SN Mandape, KB Kapema, T Duque, A Smuts, JL King, B Crysup, J Ge, ...
Forensic Science International: Genetics Supplement Series 8, 112-114, 2022
22022
Macrohaplotypes for Forensic DNA Mixture Deconvolution
J Ge, B Budowle, S Mandape, J King
US Patent App. 18/263,914, 2024
2024
Identifying distant relatives using benchtop-scale sequencing
AE Woerner, NM Novroski, S Mandape, JL King, B Crysup, MD Coble
Forensic Science International: Genetics 69, 103005, 2024
2024
Emerging Trends in Bioinformatics for Breast Cancer Molecular Research
S Mandape
Breast Cancer: Current Trends in Molecular Research, 86-108, 2022
2022
Duodenal Neuroendocrine Tumors Exhibit Distinct Transcriptome and Mutations Compared to Pancreatic Neuroendocrine Tumors and Ileal Carcinoids
K Rico, S Sheriff, S Duan, S Mandape, R Pandey, B Katona, D Metz, ...
PANCREAS 49 (3), 484-484, 2020
2020
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