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Pamela Mukhopadhyay
Pamela Mukhopadhyay
Post Doctoral Bioinformatician, QIMR Berghofer Medical Research Institute
Dirección de correo verificada de qimrberghofer.edu.au
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Whole-genome landscape of mucosal melanoma reveals diverse drivers and therapeutic targets
F Newell, Y Kong, JS Wilmott, PA Johansson, PM Ferguson, C Cui, Z Li, ...
Nature communications 10 (1), 3163, 2019
2362019
MHC class II antigen presentation by the intestinal epithelium initiates graft-versus-host disease and is influenced by the microbiota
M Koyama, P Mukhopadhyay, IS Schuster, AS Henden, J Hülsdünker, ...
Immunity 51 (5), 885-898. e7, 2019
1822019
Genetic dissection of acute anterior uveitis reveals similarities and differences in associations observed with ankylosing spondylitis
PC Robinson, TAM Claushuis, A Cortes, TM Martin, DM Evans, P Leo, ...
Arthritis & rheumatology 67 (1), 140-151, 2015
1282015
Defining the genetic susceptibility to cervical neoplasia—A genome-wide association study
PJ Leo, MM Madeleine, S Wang, SM Schwartz, F Newell, ...
PLoS genetics 13 (8), e1006866, 2017
1262017
Interaction of c-Myb with p300 is required for the induction of acute myeloid leukemia (AML) by human AML oncogenes
DR Pattabiraman, C McGirr, K Shakhbazov, V Barbier, K Krishnan, ...
Blood, The Journal of the American Society of Hematology 123 (17), 2682-2690, 2014
1232014
Whole-genome sequencing of acral melanoma reveals genomic complexity and diversity
F Newell, JS Wilmott, PA Johansson, K Nones, V Addala, ...
Nature communications 11 (1), 5259, 2020
1122020
Smchd1 regulates a subset of autosomal genes subject to monoallelic expression in addition to being critical for X inactivation
AW Mould, Z Pang, M Pakusch, ID Tonks, M Stark, D Carrie, ...
Epigenetics & chromatin 6, 1-16, 2013
1082013
A potent Chk1 inhibitor is selectively cytotoxic in melanomas with high levels of replicative stress
K Brooks, V Oakes, B Edwards, M Ranall, P Leo, S Pavey, A Pinder, ...
Oncogene 32 (6), 788-796, 2013
1022013
Multiomic profiling of checkpoint inhibitor-treated melanoma: Identifying predictors of response and resistance, and markers of biological discordance
F Newell, IP da Silva, PA Johansson, AM Menzies, JS Wilmott, V Addala, ...
Cancer cell 40 (1), 88-102. e7, 2022
812022
Whole-genome sequencing reveals clinically relevant insights into the aetiology of familial breast cancers
K Nones, J Johnson, F Newell, AM Patch, H Thorne, SH Kazakoff, ...
Annals of Oncology 30 (7), 1071-1079, 2019
662019
Progression of osteosarcoma from a non-metastatic to a metastatic phenotype is causally associated with activation of an autocrine and paracrine uPA axis
L Endo-Munoz, N Cai, A Cumming, R Macklin, L Merida de Long, ...
PLoS One 10 (8), e0133592, 2015
602015
Bone marrow transplantation generates T cell–dependent control of myeloma in mice
S Vuckovic, SA Minnie, D Smith, KH Gartlan, TS Watkins, KA Markey, ...
The Journal of clinical investigation 129 (1), 106-121, 2019
572019
Intratumoural heterogeneity underlies distinct therapy responses and treatment resistance in glioblastoma
S Akgül, AM Patch, RCJ D’souza, P Mukhopadhyay, K Nones, S Kempe, ...
Cancers 11 (2), 190, 2019
462019
Lower temperatures reduce type I interferon activity and promote alphaviral arthritis
NA Prow, B Tang, J Gardner, TT Le, A Taylor, YS Poo, E Nakayama, ...
PLoS pathogens 13 (12), e1006788, 2017
452017
Differential selective constraints shaping codon usage pattern of housekeeping and tissue-specific homologous genes of rice and Arabidopsis
P Mukhopadhyay, S Basak, TC Ghosh
DNA research 15 (6), 347-356, 2008
452008
Unique molecular profile of exosomes derived from primary human proximal tubular epithelial cells under diseased conditions
X Wang, R Wilkinson, K Kildey, J Potriquet, J Mulvenna, RJ Lobb, ...
Journal of Extracellular Vesicles 6 (1), 1314073, 2017
442017
A novel E2F/sphingosine kinase 1 axis regulates anthracycline response in squamous cell carcinoma
M Hazar-Rethinam, LM de Long, OM Gannon, E Topkas, S Boros, ...
Clinical Cancer Research 21 (2), 417-427, 2015
422015
Melanoma susceptibility as a complex trait: genetic variation controls all stages of tumor progression
B Ferguson, R Ram, HY Handoko, P Mukhopadhyay, HK Muller, ...
Oncogene 34 (22), 2879-2886, 2015
412015
Nature of selective constraints on synonymous codon usage of rice differs in GC-poor and GC-rich genes
P Mukhopadhyay, S Basak, TC Ghosh
Gene 400 (1-2), 71-81, 2007
392007
The immune checkpoint CD96 defines a distinct lymphocyte phenotype and is highly expressed on tumor‐infiltrating T cells
A Lepletier, VP Lutzky, D Mittal, K Stannard, TS Watkins, CN Ratnatunga, ...
Immunology and cell biology 97 (2), 152-164, 2019
382019
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