| Big data bioinformatics CS Greene, J Tan, M Ung, JH Moore, C Cheng Journal of cellular physiology 229 (12), 1896-1900, 2014 | 255 | 2014 |
| Unsupervised feature construction and knowledge extraction from genome-wide assays of breast cancer with denoising autoencoders J Tan, M Ung, C Cheng, CS Greene Pacific symposium on biocomputing co-chairs, 132-143, 2014 | 172 | 2014 |
| CD36-mediated metabolic rewiring of breast cancer cells promotes resistance to HER2-targeted therapies WW Feng, O Wilkins, S Bang, M Ung, J Li, J An, C Del Genio, K Canfield, ... Cell reports 29 (11), 3405-3420. e5, 2019 | 139 | 2019 |
| An integrative ENCODE resource for cancer genomics J Zhang, D Lee, V Dhiman, P Jiang, J Xu, P McGillivray, H Yang, J Liu, ... Nature communications 11 (1), 3696, 2020 | 106 | 2020 |
| Protein mistranslation protects bacteria against oxidative stress Y Fan, J Wu, MH Ung, N De Lay, C Cheng, J Ling Nucleic acids research 43 (3), 1740-1748, 2015 | 91 | 2015 |
| Receptor tyrosine kinase ERBB4 mediates acquired resistance to ERBB2 inhibitors in breast cancer cells K Canfield, J Li, OM Wilkins, MM Morrison, M Ung, W Wells, CR Williams, ... Cell Cycle 14 (4), 648-655, 2015 | 85 | 2015 |
| E2F4 regulatory program predicts patient survival prognosis in breast cancer SS Khaleel, EH Andrews, M Ung, J DiRenzo, C Cheng Breast Cancer Research 16, 1-14, 2014 | 57 | 2014 |
| Effect of estrogen receptor α binding on functional DNA methylation in breast cancer M Ung, X Ma, KC Johnson, BC Christensen, C Cheng Epigenetics 9 (4), 523-532, 2014 | 43 | 2014 |
| MYC mediates mRNA cap methylation of canonical Wnt/β-catenin signaling transcripts by recruiting CDK7 and RNA methyltransferase V Posternak, MH Ung, C Cheng, MD Cole Molecular Cancer Research 15 (2), 213-224, 2017 | 31 | 2017 |
| An approach for determining and measuring network hierarchy applied to comparing the phosphorylome and the regulome C Cheng, E Andrews, KK Yan, M Ung, D Wang, M Gerstein Genome biology 16, 1-15, 2015 | 31 | 2015 |
| Insulin-mediated signaling facilitates resistance to PDGFR inhibition in proneural hPDGFB-driven gliomas DA Almiron Bonnin, C Ran, MC Havrda, H Liu, Y Hitoshi, Z Zhang, ... Molecular Cancer Therapeutics 16 (4), 705-716, 2017 | 28 | 2017 |
| Statins associate with improved mortality among patients with certain histological subtypes of lung cancer MH Ung, TA MacKenzie, TL Onega, CI Amos, C Cheng Lung Cancer 126, 89-96, 2018 | 26 | 2018 |
| The E2F4 prognostic signature predicts pathological response to neoadjuvant chemotherapy in breast cancer patients KMK Mark, FS Varn, MH Ung, F Qian, C Cheng BMC cancer 17, 1-11, 2017 | 22 | 2017 |
| p53 and ΔNp63α coregulate the transcriptional and cellular response to TGFβ and BMP signals AL Balboni, P Cherukuri, M Ung, AJ DeCastro, C Cheng, J DiRenzo Molecular cancer research 13 (4), 732-742, 2015 | 21 | 2015 |
| Integrative analysis of survival-associated gene sets in breast cancer FS Varn, MH Ung, SK Lou, C Cheng BMC medical genomics 8, 1-16, 2015 | 19 | 2015 |
| Computational investigation of homologous recombination DNA repair deficiency in sporadic breast cancer Y Wang, MH Ung, S Cantor, C Cheng Scientific reports 7 (1), 15742, 2017 | 11 | 2017 |
| Integrative analysis of cancer genes in a functional interactome MH Ung, CC Liu, C Cheng Scientific Reports 6 (1), 29228, 2016 | 11 | 2016 |
| Cancer cell line specific co-factors modulate the FOXM1 cistrome Y Wang, MH Ung, T Xia, W Cheng, C Cheng Oncotarget 8 (44), 76498, 2017 | 9 | 2017 |
| Application of pharmacologically induced transcriptomic profiles to interrogate PI3K-Akt-mTOR pathway activity associated with cancer patient prognosis MH Ung, GL Wang, FS Varn, C Cheng Oncotarget 7 (51), 84142, 2016 | 8 | 2016 |
| Integrative genomic analyses yield cell-cycle regulatory programs with prognostic value C Cheng, S Lou, EH Andrews, MH Ung, FS Varn Molecular Cancer Research 14 (4), 332-343, 2016 | 8 | 2016 |
