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Ben Shirt-Ediss
Ben Shirt-Ediss
Postdoctoral Researcher at Donostia International Physics Centre
Verified email at shirt-ediss.me - Homepage
Title
Cited by
Cited by
Year
Modelling Lipid Competition Dynamics in Heterogeneous Protocell Populations
B Shirt-Ediss, K Ruiz-Mirazo, F Mavelli, RV Solé
Scientific Reports 4 (5675), 2014
292014
Emergent chemical behavior in variable-volume protocells
B Shirt-Ediss, RV Solé, K Ruiz-Mirazo
Life 5 (1), 181-211, 2015
262015
Framing major prebiotic transitions as stages of protocell development: three challenges for origins-of-life research
B Shirt-Ediss, S Murillo-Sánchez, K Ruiz-Mirazo
Beilstein Journal of Organic Chemistry 13, 1388-1395, 2017
232017
Cotranscriptional folding of a bio-orthogonal fluorescent scaffolded RNA origami
E Torelli, J Kozyra, B Shirt-Ediss, L Piantanida, K Voïtchovsky, ...
ACS Synthetic Biology 9 (7), 1682-1692, 2020
142020
Design of experiments and the virtual PCR simulator: An online game for pharmaceutical scientists and biotechnologists
H Fellermann, B Shirt‐Ediss, J Kozyra, M Linsley, D Lendrem, J Isaacs, ...
Pharmaceutical statistics 18 (4), 402, 2019
142019
Modelling early transitions toward autonomous protocells
BJ Shirt-Ediss
arXiv preprint arXiv:1606.03620, 2016
142016
A last-in first-out stack data structure implemented in DNA
A Lopiccolo, B Shirt-Ediss, E Torelli, AFA Olulana, M Castronovo, ...
Nature communications 12 (1), 4861, 2021
122021
The construction of biological ‘inter-identity’as the outcome of a complex process of protocell development in prebiotic evolution
K Ruiz-Mirazo, B Shirt-Ediss, M Escribano-Cabeza, A Moreno
Frontiers in Physiology 11, 522420, 2020
52020
The PCR Simulator: an on-line application for teaching Design of Experiments and the polymerase chain reaction
H Fellermann, B Shirt-Ediss, JW Koryza, M Linsley, DW Lendrem, ...
bioRxiv, 415042, 2018
42018
Light-Up Split Broccoli Aptamer as a Versatile Tool for RNA Assembly Monitoring in Cell-Free TX-TL Systems, Hybrid RNA/DNA Origami Tagging and DNA Biosensing
E Torelli, B Shirt-Ediss, SA Navarro, M Manzano, P Vizzini, N Krasnogor
International Journal of Molecular Sciences 24 (10), 8483, 2023
32023
Steady state analysis of a vesicle bioreactor with mechanosensitive channels.
B Shirt-Ediss, RV Solé, K Ruiz-Mirazo
ECAL, 1162-1169, 2013
32013
Reverse engineering DNA origami nanostructure designs from raw scaffold and staple sequence lists
B Shirt-Ediss, J Connolly, J Elezgaray, E Torelli, SA Navarro, J Bacardit, ...
Computational and Structural Biotechnology Journal 21, 3615-3626, 2023
22023
Optimizing nucleic acid sequences for a molecular data recorder
J Kozyra, H Fellermann, B Shirt-Ediss, A Lopiccolo, N Krasnogor
Proceedings of the Genetic and Evolutionary Computation Conference, 1145-1152, 2017
22017
Modelling and optimisation of a DNA stack nano-device using probabilistic model checking
B Li, N Mackenzie, B Shirt-Ediss, N Krasnogor, P Zuliani
28th International Conference on DNA Computing and Molecular Programming …, 2022
12022
Dynamical systems analysis of a protocell lipid compartment
B Shirt-Ediss
European Conference on Artificial Life, 230-239, 2009
12009
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