Elizabeth Villa
Elizabeth Villa
Verified email at ucsd.edu
TitleCited byYear
Scalable molecular dynamics with NAMD
JC Phillips, R Braun, W Wang, J Gumbart, E Tajkhorshid, E Villa, C Chipot, ...
Journal of computational chemistry 26 (16), 1781-1802, 2005
132222005
Flexible fitting of atomic structures into electron microscopy maps using molecular dynamics
LG Trabuco, E Villa, K Mitra, J Frank, K Schulten
Structure 16 (5), 673-683, 2008
6712008
Molecular architecture of the 26S proteasome holocomplex determined by an integrative approach
K Lasker, F Förster, S Bohn, T Walzthoeni, E Villa, P Unverdorben, F Beck, ...
Proceedings of the National Academy of Sciences 109 (5), 1380-1387, 2012
4152012
Ribosome-induced changes in elongation factor Tu conformation control GTP hydrolysis
E Villa, J Sengupta, LG Trabuco, J LeBarron, WT Baxter, TR Shaikh, ...
Proceedings of the National Academy of Sciences 106 (4), 1063-1068, 2009
2582009
Structural insight into nascent polypeptide chain–mediated translational stalling
B Seidelt, CA Innis, DN Wilson, M Gartmann, JP Armache, E Villa, ...
Science 326 (5958), 1412-1415, 2009
2552009
Visualizing the molecular sociology at the HeLa cell nuclear periphery
J Mahamid, S Pfeffer, M Schaffer, E Villa, R Danev, LK Cuellar, F Förster, ...
Science 351 (6276), 969-972, 2016
2432016
Molecular dynamics flexible fitting: a practical guide to combine cryo-electron microscopy and X-ray crystallography
LG Trabuco, E Villa, E Schreiner, CB Harrison, K Schulten
Methods 49 (2), 174-180, 2009
2402009
Near-atomic resolution structural model of the yeast 26S proteasome
F Beck, P Unverdorben, S Bohn, A Schweitzer, G Pfeifer, E Sakata, ...
Proceedings of the National Academy of Sciences 109 (37), 14870-14875, 2012
2352012
Focused ion beam micromachining of eukaryotic cells for cryoelectron tomography
A Rigort, FJB Bäuerlein, E Villa, M Eibauer, T Laugks, W Baumeister, ...
Proceedings of the National Academy of Sciences 109 (12), 4449-4454, 2012
2152012
Architecture of the RNA polymerase II–Mediator core initiation complex
C Plaschka, L Lariviere, L Wenzeck, M Seizl, M Hemann, D Tegunov, ...
Nature 518 (7539), 376-380, 2015
2032015
Cryo-EM structure and rRNA model of a translating eukaryotic 80S ribosome at 5.5-Å resolution
JP Armache, A Jarasch, AM Anger, E Villa, T Becker, S Bhushan, ...
Proceedings of the National Academy of Sciences 107 (46), 19748-19753, 2010
1892010
Dynein achieves processive motion using both stochastic and coordinated stepping
W Qiu, ND Derr, BS Goodman, E Villa, D Wu, W Shih, SL Reck-Peterson
Nature structural & molecular biology 19 (2), 193, 2012
1832012
Structural dynamics of the lac repressor–DNA complex revealed by a multiscale simulation
E Villa, A Balaeff, K Schulten
Proceedings of the National Academy of Sciences 102 (19), 6783-6788, 2005
1672005
Native architecture of the Chlamydomonas chloroplast revealed by in situ cryo-electron tomography
BD Engel, M Schaffer, LK Cuellar, E Villa, JM Plitzko, W Baumeister
Elife 4, e04889, 2015
1552015
Localization of eukaryote-specific ribosomal proteins in a 5.5-Å cryo-EM map of the 80S eukaryotic ribosome
JP Armache, A Jarasch, AM Anger, E Villa, T Becker, S Bhushan, ...
Proceedings of the National Academy of Sciences 107 (46), 19754-19759, 2010
1392010
Structure of the no-go mRNA decay complex Dom34–Hbs1 bound to a stalled 80S ribosome
T Becker, JP Armache, A Jarasch, AM Anger, E Villa, H Sieber, BA Motaal, ...
Nature structural & molecular biology 18 (6), 715, 2011
1312011
A photoactivable multi-inhibitor nanoliposome for tumour control and simultaneous inhibition of treatment escape pathways
BQ Spring, RB Sears, LZ Zheng, Z Mai, R Watanabe, ME Sherwood, ...
Nature nanotechnology 11 (4), 378, 2016
1242016
Regulation of the protein-conducting channel by a bound ribosome
J Gumbart, LG Trabuco, E Schreiner, E Villa, K Schulten
Structure 17 (11), 1453-1464, 2009
1102009
Opening windows into the cell: focused-ion-beam milling for cryo-electron tomography
E Villa, M Schaffer, JM Plitzko, W Baumeister
Current opinion in structural biology 23 (5), 771-777, 2013
992013
Multiscale method for simulating protein-DNA complexes
E Villa, A Balaeff, L Mahadevan, K Schulten
Multiscale Modeling & Simulation 2 (4), 527-553, 2004
942004
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Articles 1–20