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Fabien Jourdan
Fabien Jourdan
INRAE
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Año
Multiscale visualization of small world networks
D Auber, Y Chiricota, F Jourdan, G Melançon
IEEE Symposium on Information Visualization 2003 (IEEE Cat. No. 03TH8714), 75-81, 2003
3182003
MetExplore: a web server to link metabolomic experiments and genome-scale metabolic networks
L Cottret, D Wildridge, F Vinson, MP Barrett, H Charles, MF Sagot, ...
Nucleic acids research 38 (suppl_2), W132-W137, 2010
1972010
Can we trust untargeted metabolomics? Results of the metabo-ring initiative, a large-scale, multi-instrument inter-laboratory study
JC Martin, M Maillot, G Mazerolles, A Verdu, B Lyan, C Migné, C Defoort, ...
Metabolomics 11, 807-821, 2015
1272015
Software components capture using graph clustering
Y Chiricota, F Jourdan, G Melançon
11th IEEE International Workshop on Program Comprehension, 2003., 217-226, 2003
1242003
MetExplore: collaborative edition and exploration of metabolic networks
L Cottret, C Frainay, M Chazalviel, F Cabanettes, Y Gloaguen, ...
Nucleic acids research 46 (W1), W495-W502, 2018
1202018
Communities and hierarchical structures in dynamic social networks: analysis and visualization
F Gilbert, P Simonetto, F Zaidi, F Jourdan, R Bourqui
Social Network Analysis and Mining 1 (2), 83-95, 2011
822011
Pathway analysis in metabolomics: Recommendations for the use of over-representation analysis
C Wieder, C Frainay, N Poupin, P Rodríguez-Mier, F Vinson, J Cooke, ...
PLoS computational biology 17 (9), e1009105, 2021
812021
Mitochondrial metabolism supports resistance to IDH mutant inhibitors in acute myeloid leukemia
L Stuani, M Sabatier, E Saland, G Cognet, N Poupin, C Bosc, FA Castelli, ...
Journal of Experimental Medicine 218 (5), e20200924, 2021
762021
MetaNetter: inference and visualization of high-resolution metabolomic networks
F Jourdan, R Breitling, MP Barrett, D Gilbert
Bioinformatics 24 (1), 143-145, 2008
752008
Computational methods to identify metabolic sub-networks based on metabolomic profiles
C Frainay, F Jourdan
Briefings in bioinformatics 18 (1), 43-56, 2017
722017
PhenoMeNal: processing and analysis of metabolomics data in the cloud
K Peters, J Bradbury, S Bergmann, M Capuccini, M Cascante, P de Atauri, ...
GigaScience 8 (2), giy149, 2019
712019
ProbMetab: an R package for Bayesian probabilistic annotation of LC–MS-based metabolomics
RR Silva, F Jourdan, DM Salvanha, F Letisse, EL Jamin, ...
Bioinformatics 30 (9), 1336-1337, 2014
692014
Multiscale hybrid MDS
F Jourdan, G Melangon
Proceedings. Eighth International Conference on Information Visualisation …, 2004
672004
Mind the gap: mapping mass spectral databases in genome-scale metabolic networks reveals poorly covered areas
C Frainay, EL Schymanski, S Neumann, B Merlet, RM Salek, F Jourdan, ...
Metabolites 8 (3), 51, 2018
652018
Metabolic network visualization eliminating node redundance and preserving metabolic pathways
R Bourqui, L Cottret, V Lacroix, D Auber, P Mary, MF Sagot, F Jourdan
BMC systems biology 1, 1-19, 2007
652007
Integrated transcriptomics and metabolomics reveal signatures of lipid metabolism dysregulation in HepaRG liver cells exposed to PCB 126
R Mesnage, M Biserni, S Balu, C Frainay, N Poupin, F Jourdan, ...
Archives of Toxicology 92, 2533-2547, 2018
562018
MetExploreViz: web component for interactive metabolic network visualization
M Chazalviel, C Frainay, N Poupin, F Vinson, B Merlet, Y Gloaguen, ...
Bioinformatics 34 (2), 312-313, 2018
512018
Networks and graphs discovery in metabolomics data analysis and interpretation
A Amara, C Frainay, F Jourdan, T Naake, S Neumann, ...
Frontiers in Molecular Biosciences 9, 841373, 2022
492022
The GOLIATH project: Towards an internationally harmonised approach for testing metabolism disrupting compounds
J Legler, D Zalko, F Jourdan, M Jacobs, B Fromenty, P Balaguer, ...
International Journal of Molecular Sciences 21 (10), 3480, 2020
422020
Dynamic metabolic disruption in rats perinatally exposed to low doses of bisphenol-A
M Tremblay-Franco, NJ Cabaton, C Canlet, R Gautier, CM Schaeberle, ...
PLoS One 10 (10), e0141698, 2015
422015
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