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Francesc Fernandez Albert
Francesc Fernandez Albert
Director of R&D Data Science at Almirall
Dirección de correo verificada de almirall.com
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BATLAS: deconvoluting brown adipose tissue
A Perdikari, GG Leparc, M Balaz, ND Pires, ME Lidell, W Sun, ...
Cell reports 25 (3), 784-797. e4, 2018
982018
DMSO cryopreservation is the method of choice to preserve cells for droplet-based single-cell RNA sequencing
CT Wohnhaas, GG Leparc, F Fernandez-Albert, D Kind, F Gantner, ...
Scientific reports 9 (1), 10699, 2019
882019
FELLA: an R package to enrich metabolomics data
S Picart-Armada, F Fernández-Albert, M Vinaixa, O Yanes, ...
BMC bioinformatics 19, 1-9, 2018
822018
An R package to analyse LC/MS metabolomic data: MAIT (Metabolite Automatic Identification Toolkit)
F Fernández-Albert, R Llorach, C Andrés-Lacueva, A Perera
Bioinformatics 30 (13), 1937-1939, 2014
822014
Intensity drift removal in LC/MS metabolomics by common variance compensation
F Fernández-Albert, R Llorach, M Garcia-Aloy, A Ziyatdinov, ...
Bioinformatics 30 (20), 2899-2905, 2014
682014
Molecular characterization and cell type composition deconvolution of fibrosis in NAFLD
L Pantano, G Agyapong, Y Shen, Z Zhuo, F Fernandez-Albert, W Rust, ...
Scientific reports 11 (1), 18045, 2021
472021
Null diffusion-based enrichment for metabolomics data
S Picart-Armada, F Fernández-Albert, M Vinaixa, MA Rodríguez, S Aivio, ...
PloS one 12 (12), e0189012, 2017
392017
In-depth transcriptomic analysis of human retina reveals molecular mechanisms underlying diabetic retinopathy
K Becker, H Klein, E Simon, C Viollet, C Haslinger, G Leparc, ...
Scientific reports 11 (1), 10494, 2021
352021
Mapping the metabolomic and lipidomic changes in the bleomycin model of pulmonary fibrosis in young and aged mice
J Weckerle, S Picart-Armada, S Klee, T Bretschneider, AH Luippold, ...
Disease models & mechanisms 15 (1), dmm049105, 2022
192022
Peak Aggregation as an Innovative Strategy for Improving the Predictive Power of LC-MS Metabolomic Profiles
F Fernández-Albert, R Llorach, C Andrés-Lacueva, A Perera-Lluna
Analytical chemistry, 2014
132014
Stress deficits in reward behaviour are associated with and replicated by dysregulated amygdala-nucleus accumbens pathway function in mice
L Madur, C Ineichen, G Bergamini, A Greter, G Poggi, N Cuomo-Haymour, ...
Communications Biology 6 (1), 422, 2023
102023
A dual druggable genome-wide siRNA and compound library screening approach identifies modulators of parkin recruitment to mitochondria
HL Scott, N Buckner, F Fernandez-Albert, E Pedone, L Postiglione, G Shi, ...
Journal of Biological Chemistry 295 (10), 3285-3300, 2020
92020
Machine learning methods for the analysis of liquid chromatography-mass spectrometry datasets in metabolomics
F Fernández Albert
Universitat Politècnica de Catalunya, 2014
82014
Knowledge graphs for indication expansion: an explainable target-disease prediction method
O Gurbuz, G Alanis-Lobato, S Picart-Armada, M Sun, C Haslinger, ...
Frontiers in genetics 13, 814093, 2022
62022
HieRFIT: a hierarchical cell type classification tool for projections from complex single-cell atlas datasets
Y Kaymaz, F Ganglberger, M Tang, C Haslinger, F Fernandez-Albert, ...
Bioinformatics 37 (23), 4431-4436, 2021
42021
HieRFIT: Hierarchical Random Forest for Information Transfer
Y Kaymaz, F Ganglberger, M Tang, F Fernandez-Albert, N Lawless, ...
bioRxiv, 2020.09. 16.300822, 2020
32020
Transcriptomic and proteomic profiling of young and old mice in the bleomycin model reveals high similarity
S Klee, S Picart-Armada, K Wenger, G Birk, K Quast, D Veyel, W Rist, ...
American Journal of Physiology-Lung Cellular and Molecular Physiology 324 (3 …, 2023
12023
Transcriptome analysis of AAV-induced retinopathy models expressing human VEGF, TNF-α, and IL-6 in murine eyes
K Becker, CM Weigelt, H Fuchs, C Viollet, W Rust, H Wyatt, J Huber, ...
Scientific Reports 12 (1), 19395, 2022
12022
Network-based enrichment analysis of gene expression through protein-protein interaction data
R Massanet-Vila, FF Albert, P Caminal, A Perera
2012 Annual International Conference of the IEEE Engineering in Medicine and …, 2012
12012
BrainTACO: an explorable multi-scale multi-modal brain transcriptomic and connectivity data resource
F Ganglberger, D Kargl, M Töpfer, J Hernandez-Lallement, N Lawless, ...
Communications Biology 7 (1), 730, 2024
2024
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