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Vladimir Kaberdin
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Proteins associated with RNase E in a multicomponent ribonucleolytic complex.
A Miczak, VR Kaberdin, CL Wei, S Lin-Chao
Proceedings of the National Academy of Sciences 93 (9), 3865-3869, 1996
4551996
Coincident Hfq binding and RNase E cleavage sites on mRNA and small regulatory RNAs
I Moll, T Afonyushkin, O Vytvytska, VR Kaberdin, UDO Bläsi
Rna 9 (11), 1308-1314, 2003
3402003
Hfq (HF1) stimulates ompA mRNA decay by interfering with ribosome binding
O Vytvytska, I Moll, VR Kaberdin, A von Gabain, U Bläsi
Genes & development 14 (9), 1109-1118, 2000
2472000
Both RNase E and RNase III control the stability of sodB mRNA upon translational inhibition by the small regulatory RNA RyhB
T Afonyushkin, B Vecˇerek, I Moll, U Blasi, VR Kaberdin
Nucleic Acids Research 33 (5), 1678-1689, 2005
2182005
Site-specific RNase E cleavage of oligonucleotides and inhibition by stem–loops
KJ McDowall, VR Kaberdin, SW Wu, SN Cohen, S Lin-Chao
Nature 374 (6519), 287-290, 1995
1821995
Translation initiation and the fate of bacterial mRNAs
VR Kaberdin, U Bläsi
FEMS microbiology reviews 30 (6), 967-979, 2006
1802006
The endoribonucleolytic N-terminal half of Escherichia coli RNase E is evolutionarily conserved in Synechocystis sp. and other bacteria but not the C-terminal half …
VR Kaberdin, A Miczak, JS Jakobsen, S Lin-Chao, KJ McDowall, ...
Proceedings of the National Academy of Sciences 95 (20), 11637-11642, 1998
1671998
Interaction of the RNA chaperone Hfq with mRNAs: direct and indirect roles of Hfq in iron metabolism of Escherichia coli
B Večerek, I Moll, T Afonyushkin, V Kaberdin, U Bläsi
Molecular microbiology 50 (3), 897-909, 2003
1432003
Regulation of ribonuclease E activity by the L4 ribosomal protein of Escherichia coli
D Singh, SJ Chang, PH Lin, OV Averina, VR Kaberdin, S Lin-Chao
Proceedings of the National Academy of Sciences 106 (3), 864-869, 2009
972009
Probing the substrate specificity of Escherichia coli RNase E using a novel oligonucleotide‐based assay
VR Kaberdin
Nucleic acids research 31 (16), 4710-4716, 2003
862003
Distinct and overlapping binding sites of Pseudomonas aeruginosa Hfq and RsmA proteins on the non-coding RNA RsmY
T Sorger-Domenigg, E Sonnleitner, VR Kaberdin, U Bläsi
Biochemical and biophysical research communications 352 (3), 769-773, 2007
852007
RNA components of Escherichia coli degradosome: Evidence for rRNA decay
DA Bessarab, VR Kaberdin, CL Wei, GG Liou, S Lin-Chao
Proceedings of the National Academy of Sciences 95 (6), 3157-3161, 1998
821998
Translational activation by the noncoding RNA DsrA involves alternative RNase III processing in the rpoS 5′-leader
A Resch, T Afonyushkin, TB Lombo, KJ McDowall, U Bläsi, VR Kaberdin
RNA 14 (3), 454-459, 2008
772008
Translation initiation factor a/eIF2 (-γ) counteracts 5′ to 3′ mRNA decay in the archaeon Sulfolobus solfataricus
D Hasenöhrl, T Lombo, V Kaberdin, P Londei, U Bläsi
Proceedings of the National Academy of Sciences 105 (6), 2146-2150, 2008
692008
Composition and conservation of the mRNA-degrading machinery in bacteria
VR Kaberdin, D Singh, S Lin-Chao
Journal of biomedical science 18, 1-12, 2011
662011
Enhanced cleavage of RNA mediated by an interaction between substrates and the arginine-rich domain of E. coli ribonuclease E
VR Kaberdin, AP Walsh, T Jakobsen, KJ McDowall, A von Gabain
Journal of molecular biology 301 (2), 257-264, 2000
662000
Determination of the catalytic parameters of the N-terminal half of Escherichia coli ribonuclease E and the identification of critical functional groups in RNA substrates
Y Redko, MR Tock, CJ Adams, VR Kaberdin, JA Grasby, KJ McDowall
Journal of Biological Chemistry 278 (45), 44001-44008, 2003
582003
A comparison of key aspects of gene regulation in Streptomyces coelicolor and Escherichia coli using nucleotide‐resolution transcription maps produced in …
DA Romero, AH Hasan, Y Lin, L Kime, O Ruiz‐Larrabeiti, M Urem, ...
Molecular Microbiology 94 (5), 963-987, 2014
562014
Cleavage of poly(A) tails on the 3′-end of RNA by ribonuclease E of Escherichia coli
AP Walsh, MR Tock, MH Mallen, VR Kaberdin, A Gabain, KJ McDowall
Nucleic acids research 29 (9), 1864-1871, 2001
542001
Vibrio harveyi: A brief survey of general characteristics and recent epidemiological traits associated with climate change
I Montánchez, VR Kaberdin
Marine environmental research 154, 104850, 2020
532020
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