Nenad Bartonicek
Nenad Bartonicek
Senior Bioinformatician at Peter Mac
Verified email at
Cited by
Cited by
lncRNAdb v2. 0: expanding the reference database for functional long noncoding RNAs
XC Quek, DW Thomson, JLV Maag, N Bartonicek, B Signal, MB Clark, ...
Nucleic acids research 43 (D1), D168-D173, 2015
Long noncoding RNAs in cancer: mechanisms of action and technological advancements
N Bartonicek, JLV Maag, ME Dinger
Molecular cancer 15 (1), 1-10, 2016
A single-cell and spatially resolved atlas of human breast cancers
SZ Wu, G Al-Eryani, DL Roden, S Junankar, K Harvey, A Andersson, ...
Nature genetics 53 (9), 1334-1347, 2021
Kraken: a set of tools for quality control and analysis of high-throughput sequence data
MPA Davis, S van Dongen, C Abreu-Goodger, N Bartonicek, AJ Enright
Methods 63 (1), 41-49, 2013
The miR-144/451 locus is required for erythroid homeostasis
KD Rasmussen, S Simmini, C Abreu-Goodger, N Bartonicek, ...
Journal of Experimental Medicine 207 (7), 1351-1358, 2010
Evidence that TLR4 is not a receptor for saturated fatty acids but mediates lipid-induced inflammation by reprogramming macrophage metabolism
GI Lancaster, KG Langley, NA Berglund, HL Kammoun, S Reibe, ...
Cell metabolism 27 (5), 1096-1110. e5, 2018
The endonuclease activity of Mili fuels piRNA amplification that silences LINE1 elements
S De Fazio, N Bartonicek, M Di Giacomo, C Abreu-Goodger, A Sankar, ...
Nature 480 (7376), 259-263, 2011
Stromal cell diversity associated with immune evasion in human triple‐negative breast cancer
SZ Wu, DL Roden, C Wang, H Holliday, K Harvey, AS Cazet, KJ Murphy, ...
The EMBO journal 39 (19), e104063, 2020
Targeted deletion of microRNA-22 promotes stress-induced cardiac dilation and contractile dysfunction
P Gurha, C Abreu-Goodger, T Wang, MO Ramirez, AL Drumond, ...
Circulation 125 (22), 2751-2761, 2012
MiR-221 influences effector functions and actin cytoskeleton in mast cells
RJ Mayoral, L Deho, N Rusca, N Bartonicek, HK Saini, AJ Enright, ...
PloS one 6 (10), e26133, 2011
Droplet-based single cell RNAseq tools: a practical guide
R Salomon, D Kaczorowski, F Valdes-Mora, RE Nordon, A Neild, ...
Lab on a Chip 19 (10), 1706-1727, 2019
Long noncoding RNAs CUPID1 and CUPID2 mediate breast cancer risk at 11q13 by modulating the response to DNA damage
JA Betts, MM Marjaneh, F Al-Ejeh, YC Lim, W Shi, H Sivakumaran, ...
The American Journal of Human Genetics 101 (2), 255-266, 2017
The long noncoding RNA lncNB1 promotes tumorigenesis by interacting with ribosomal protein RPL35
PY Liu, AE Tee, G Milazzo, KM Hannan, J Maag, S Mondal, B Atmadibrata, ...
Nature communications 10 (1), 5026, 2019
miR-221 affects multiple cancer pathways by modulating the level of hundreds messenger RNAs
L Lupini, C Bassi, M Ferracin, N Bartonicek, L D'Abundo, B Zagatti, ...
Frontiers in genetics 4, 64, 2013
Lipid uptake is an androgen-enhanced lipid supply pathway associated with prostate cancer disease progression and bone metastasis
KD Tousignant, A Rockstroh, A Taherian Fard, ML Lehman, C Wang, ...
Molecular Cancer Research 17 (5), 1166-1179, 2019
Extent, causes, and consequences of small RNA expression variation in human adipose tissue
L Parts, ÅK Hedman, S Keildson, AJ Knights, C Abreu-Goodger, ...
PLoS genetics 8 (5), e1002704, 2012
Osteocyte transcriptome mapping identifies a molecular landscape controlling skeletal homeostasis and susceptibility to skeletal disease
SE Youlten, JP Kemp, JG Logan, EJ Ghirardello, CM Sergio, MRG Dack, ...
Nature Communications 12 (1), 2444, 2021
Intergenic disease-associated regions are abundant in novel transcripts
N Bartonicek, MB Clark, XC Quek, JR Torpy, AL Pritchard, JLV Maag, ...
Genome biology 18 (1), 1-16, 2017
SylArray: a web server for automated detection of miRNA effects from expression data
N Bartonicek, AJ Enright
Bioinformatics 26 (22), 2900-2901, 2010
Targeted, high-resolution RNA sequencing of non-coding genomic regions associated with neuropsychiatric functions
SA Hardwick, SD Bassett, D Kaczorowski, J Blackburn, K Barton, ...
Frontiers in Genetics 10, 309, 2019
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