Segment anything model (sam) for digital pathology: Assess zero-shot segmentation on whole slide imaging R Deng, C Cui, Q Liu, T Yao, LW Remedios, S Bao, BA Landman, ... arXiv preprint arXiv:2304.04155, 2023 | 177 | 2023 |
All-in-sam: from weak annotation to pixel-wise nuclei segmentation with prompt-based finetuning C Cui, R Deng, Q Liu, T Yao, S Bao, LW Remedios, BA Landman, Y Tang, ... Journal of Physics: Conference Series 2722 (1), 012012, 2024 | 31 | 2024 |
Cross-scale multi-instance learning for pathological image diagnosis R Deng, C Cui, LW Remedios, S Bao, RM Womick, S Chiron, J Li, ... Medical image analysis 94, 103124, 2024 | 15 | 2024 |
Segment anything model (sam) for digital pathology: Assess zero-shot segmentation on whole slide imaging. arXiv 2023 R Deng, C Cui, Q Liu, T Yao, LW Remedios, S Bao, BA Landman, ... arXiv preprint arXiv:2304.04155, 0 | 10 | |
Cross-scale attention guided multi-instance learning for crohn’s disease diagnosis with pathological images R Deng, C Cui, LW Remedios, S Bao, RM Womick, S Chiron, J Li, ... International Workshop on Multiscale Multimodal Medical Imaging, 24-33, 2022 | 8 | 2022 |
Comparison of convolutional neural networks for detecting large vessel occlusion on computed tomography angiography LW Remedios, S Lingam, SW Remedios, R Gao, SW Clark, LT Davis, ... Medical physics 48 (10), 6060-6068, 2021 | 7 | 2021 |
Democratizing pathological image segmentation with lay annotators via molecular-empowered learning R Deng, Y Li, P Li, J Wang, LW Remedios, S Agzamkhodjaev, Z Asad, ... International Conference on Medical Image Computing and Computer-Assisted …, 2023 | 6 | 2023 |
Semantic-aware contrastive learning for multi-object medical image segmentation HH Lee, Y Tang, Q Yang, X Yu, LY Cai, LW Remedios, S Bao, ... IEEE journal of biomedical and health informatics 27 (9), 4444-4453, 2023 | 5 | 2023 |
Alleviating tiling effect by random walk sliding window in high-resolution histological whole slide image synthesis S Bao, HH Lee, Q Yang, LW Remedios, R Deng, C Cui, LY Cai, K Xu, ... Proceedings of machine learning research 227, 1406, 2024 | 4 | 2024 |
Ultra-high-resolution mapping of cortical layers 3T-guided 7T MRI K Ramadass, F Rheault, LY Cai, LW Remedios, M D'Archangel, I Lyu, ... Medical Imaging 2022: Image Processing 12032, 391-397, 2022 | 4 | 2022 |
Predicting Crohn’s disease severity in the colon using mixed cell nucleus density from pseudo labels LW Remedios, S Bao, CI Kerley, LY Cai, F Rheault, R Deng, C Cui, ... Medical Imaging 2023: Digital and Computational Pathology 12471, 302-309, 2023 | 3 | 2023 |
TractEM: evaluation of protocols for deterministic tractography white matter atlas F Rheault, RG Bayrak, X Wang, KG Schilling, JM Greer, CB Hansen, ... Magnetic resonance imaging 85, 44-56, 2022 | 3 | 2022 |
Nucleus subtype classification using inter-modality learning LW Remedios, S Bao, SW Remedios, HH Lee, L Cai, T Li, R Deng, C Cui, ... Medical Imaging 2024: Digital and Computational Pathology 12933, 92-100, 2024 | 2 | 2024 |
Evaluation of mean shift, ComBat, and CycleGAN for harmonizing brain connectivity matrices across sites H Xu, NR Newlin, ME Kim, C Gao, P Kanakaraj, AR Krishnan, ... Proceedings of SPIE--the International Society for Optical Engineering 12926, 2024 | 2 | 2024 |
MxIF Q-score: Biology-Informed Quality Assurance for Multiplexed Immunofluorescence Imaging S Bao, J Li, C Cui, Y Tang, R Deng, LW Remedios, HH Lee, S Chiron, ... International Workshop on Medical Optical Imaging and Virtual Microscopy …, 2022 | 2 | 2022 |
Harmonized connectome resampling for variance in voxel sizes EM McMaster, NR Newlin, G Rudravaram, AM Saunders, AR Krishnan, ... arXiv preprint arXiv:2408.01351, 2024 | 1 | 2024 |
Lung CT harmonization of paired reconstruction kernel images using generative adversarial networks AR Krishnan, K Xu, TZ Li, LW Remedios, KL Sandler, F Maldonado, ... Medical Physics, 2024 | 1 | 2024 |
Feasibility of Universal Anomaly Detection Without Knowing the Abnormality in Medical Images C Cui, Y Wang, S Bao, Y Tang, R Deng, LW Remedios, Z Asad, ... Workshop on Medical Image Learning with Limited and Noisy Data, 82-92, 2023 | 1 | 2023 |
Cell Spatial Analysis in Crohn's Disease: Unveiling Local Cell Arrangement Pattern with Graph-based Signatures S Bao, S Zhu, VL Kolachala, LW Remedios, Y Hwang, Y Sun, R Deng, ... arXiv preprint arXiv:2308.10166, 2023 | 1 | 2023 |
Topological-preserving membrane skeleton segmentation in multiplex immunofluorescence imaging S Bao, C Cui, J Li, Y Tang, HH Lee, R Deng, LW Remedios, X Yu, Q Yang, ... Medical Imaging 2023: Digital and Computational Pathology 12471, 62-71, 2023 | 1 | 2023 |