Irene Julca
Irene Julca
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Genome sequence of the olive tree, Olea europaea
F Cruz, I Julca, J Gómez-Garrido, D Loska, M Marcet-Houben, E Cano, ...
Gigascience 5 (1), s13742-016-0134-5, 2016
Rapid transcriptional plasticity of duplicated gene clusters enables a clonally reproducing aphid to colonise diverse plant species
TC Mathers, Y Chen, G Kaithakottil, F Legeai, ST Mugford, ...
Genome biology 18, 1-20, 2017
A comprehensive genome variation map of melon identifies multiple domestication events and loci influencing agronomic traits
G Zhao, Q Lian, Z Zhang, Q Fu, Y He, S Ma, V Ruggieri, AJ Monforte, ...
Nature Genetics 51 (11), 1607-1615, 2019
Transposons played a major role in the diversification between the closely related almond and peach genomes: results from the almond genome sequence
T Alioto, KG Alexiou, A Bardil, F Barteri, R Castanera, F Cruz, A Dhingra, ...
The Plant Journal 101 (2), 455-472, 2020
Comparative transcriptomic analysis reveals conserved programmes underpinning organogenesis and reproduction in land plants
I Julca, C Ferrari, M Flores-Tornero, S Proost, AC Lindner, D Hackenberg, ...
Nature Plants 7 (8), 1143-1159, 2021
Xeroprotectants for the stabilization of biomaterials
I Julca, M Alaminos, J González-López, M Manzanera
Biotechnology advances 30 (6), 1641-1654, 2012
Genomic evidence for recurrent genetic admixture during the domestication of Mediterranean olive trees (Olea europaea L.)
I Julca, M Marcet-Houben, F Cruz, J Gómez-Garrido, BS Gaut, CM Díez, ...
BMC biology 18, 1-25, 2020
Contrasting Genomic Diversity in Two Closely Related Postharvest Pathogens: Penicillium digitatum and Penicillium expansum
I Julca, S Droby, N Sela, M Marcet-Houben, T Gabaldon
Genome Biology and Evolution 8 (1), 218-227, 2016
Phylogenomics of the olive tree (Olea europaea) reveals the relative contribution of ancient allo- and autopolyploidization events
I Julca, M Marcet-Houben, P Vargas, T Gabaldón
BMC biology 16, 1-15, 2018
Phylogenomics identifies an ancestral burst of gene duplications predating the diversification of Aphidomorpha
I Julca, M Marcet-Houben, F Cruz, C Vargas-Chavez, JS Johnston, ...
Molecular Biology and Evolution 37 (3), 730-756, 2020
Soybean aphid biotype 1 genome: Insights into the invasive biology and adaptive evolution of a major agricultural pest
R Giordano, RK Donthu, AV Zimin, ICJ Chavez, T Gabaldon, ...
Insect biochemistry and molecular biology 120, 103334, 2020
Toward kingdom-wide analyses of gene expression
I Julca, QW Tan, M Mutwil
Trends in Plant Science 28 (2), 235-249, 2023
Genomic, transcriptomic, and metabolomic analysis of Oldenlandia corymbosa reveals the biosynthesis and mode of action of anti‐cancer metabolites
I Julca, D Mutwil‐Anderwald, V Manoj, Z Khan, SK Lai, LK Yang, IT Beh, ...
Journal of Integrative Plant Biology 65 (6), 1442-1466, 2023
Removing auto-activators from yeast-two-hybrid assays by conditional negative selection
D Shivhare, M Musialak-Lange, I Julca, P Gluza, M Mutwil
Scientific Reports 11 (1), 5477, 2021
Fungi. guru: Comparative genomic and transcriptomic resource for the fungi kingdom
JJJ Lim, J Koh, JR Moo, EMF Villanueva, DA Putri, YS Lim, WS Seetoh, ...
Computational and Structural Biotechnology Journal 18, 3788-3795, 2020
OMA orthology in 2024: improved prokaryote coverage, ancestral and extant GO enrichment, a revamped synteny viewer and more in the OMA Ecosystem
AM Altenhoff, A Warwick Vesztrocy, C Bernard, CM Train, ...
Nucleic Acids Research 52 (D1), D513-D521, 2024
The conserved transcriptional program of metazoan male germ cells uncovers ancient origins of human infertility
RB Correia, JM Almeida, MJ Wyrwoll, I Julca, D Sobral, CS Misra, ...
Biorxiv, 2022.03. 02.482557, 2022
Genome sequence of the olive tree, olea europaea. Gigascience. 2016; 5: 29
F Cruz, I Julca, J Gómez-Garrido, D Loska, M Marcet-Houben, E Cano, ...
Phylogenomics of the Olea europaea complex using 15 whole genomes supports recurrent genetic admixture together with differentiation into seven subspecies
I Julca, P Vargas, T Gabaldón
BMC biology 21 (1), 85, 2023
Redesigning plant specialized metabolism with supervised machine learning using publicly available reactome data
PK Lim, I Julca, M Mutwil
Computational and Structural Biotechnology Journal 21, 1639-1650, 2023
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