| Martini 3: a general purpose force field for coarse-grained molecular dynamics PCT Souza, R Alessandri, J Barnoud, S Thallmair, I Faustino, ... Nature methods 18 (4), 382-388, 2021 | 642 | 2021 |
| Transferable MARTINI model of poly (ethylene oxide) F Grunewald, G Rossi, AH De Vries, SJ Marrink, L Monticelli The journal of physical chemistry B 122 (29), 7436-7449, 2018 | 113 | 2018 |
| The martini model in materials science R Alessandri, F Grünewald, SJ Marrink Advanced Materials 33 (24), 2008635, 2021 | 70 | 2021 |
| Titratable Martini model for constant pH simulations F Grünewald, PCT Souza, H Abdizadeh, J Barnoud, AH de Vries, ... The Journal of chemical physics 153 (2), 2020 | 64 | 2020 |
| Polyply; a python suite for facilitating simulations of macromolecules and nanomaterials F Grünewald, R Alessandri, PC Kroon, L Monticelli, PCT Souza, ... Nature communications 13 (1), 68, 2022 | 57 | 2022 |
| Molecular dynamics simulation of an entire cell JA Stevens, F Grünewald, PAM van Tilburg, M König, BR Gilbert, TA Brier, ... Frontiers in Chemistry 11, 1106495, 2023 | 44 | 2023 |
| Molecular architecture and dynamics of SARS-CoV-2 envelope by integrative modeling W Pezeshkian, F Grünewald, O Narykov, S Lu, V Arkhipova, ... Structure 31 (4), 492-503. e7, 2023 | 33 | 2023 |
| Martinize2 and vermouth: unified framework for topology generation. Elife 12 PC Kroon, F Grunewald, J Barnoud, M Tilburg, PCT Souza, ... RP90627, 2023 | 31* | 2023 |
| Martini 3 coarse-grained force field for carbohydrates F Grünewald, MH Punt, EE Jefferys, PA Vainikka, M König, V Virtanen, ... Journal of Chemical Theory and Computation 18 (12), 7555-7569, 2022 | 30 | 2022 |
| Protocol for simulations of PEGylated proteins with martini 3 F Grünewald, PC Kroon, PCT Souza, SJ Marrink Structural Genomics: General Applications, 315-335, 2021 | 13 | 2021 |
| pH-Dependent Conformational Switch Impacts Stability of the PsbS Dimer MG Chiariello, F Grünewald, R Zarmiento-Garcia, SJ Marrink The Journal of Physical Chemistry Letters 14 (4), 905-911, 2023 | 6 | 2023 |
| Strategies for enhancing the dielectric constant of organic materials S Sami, R Alessandri, JB W. Wijaya, F Grünewald, AH De Vries, ... The Journal of Physical Chemistry C 126 (45), 19462-19469, 2022 | 6 | 2022 |
| A Guide to Titratable Martini Simulations S Sami, F Grünewald, PCT Souza, SJ Marrink A Practical Guide to Recent Advances in Multiscale Modeling and Simulation …, 2023 | 3 | 2023 |
| Shocker─ A Molecular Dynamics Protocol and Tool for Accelerating and Analyzing the Effects of Osmotic Shocks MPA van Tilburg, SJ Marrink, M König, F Grünewald Journal of Chemical Theory and Computation 20 (1), 212-223, 2023 | 1 | 2023 |
| The onset of whole-cell modeling using the martini force field JA Stevens, F Grunewald, M van Tilburg, ZR Thornburg, BR Gilbert, ... Biophysical journal 122 (3), 421a, 2023 | 1 | 2023 |
| The martini 3 ecosystem for coarse-grained simulations F Grunewald, PCT Souza, SJ Marrink Biophysical Journal 122 (3), 419a-420a, 2023 | 1 | 2023 |
| Curvature-induced lipid sorting beyond the critical packing parameter M Konig, R de Vries, F Grunewald, SJ Marrink, W Pezeshkian bioRxiv, 2023.12. 15.571845, 2023 | 1 | 2023 |
| Dynamics of chromosome organization in a minimal bacterial cell BR Gilbert, ZR Thornburg, TA Brier, JA Stevens, F Grünewald, JE Stone, ... Frontiers in Cell and Developmental Biology 11, 2023 | 1 | 2023 |
| Dynamics of chromosome organization in a minimal bacterial cell BR Gilbert, ZR Thornburg, TA Brier, JA Stevens, F Grunewald, JE Stone, ... Biophysical Journal 123 (3), 327a, 2024 | | 2024 |
| GōMartini 3: From large conformational changes in proteins to environmental bias corrections PCT Souza, LP Borges Araujo, C Brasnett, RA Moreira, F Grunewald, ... bioRxiv, 2024.04. 15.589479, 2024 | | 2024 |
Siewert J. MarrinkProfessor of Molecular Dynamics, University of GroningenVerified email at rug.nl
